Pairwise Alignments

Query, 330 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 316 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  113 bits (283), Expect = 5e-30
 Identities = 99/327 (30%), Positives = 156/327 (47%), Gaps = 29/327 (8%)

Query: 13  IGLLLYPGVQRAAVHGLADLFLVANRV--AAE------LGAVELPHIRVSCWQADETGQL 64
           + + L+P      + G  ++F +ANR   AAE      LG    P +R S   A +T  L
Sbjct: 4   VAMALFPDFLLLDMAGPLEVFSIANRYLPAAEHYRILTLGTEPGP-LRASNGVAVQTDLL 62

Query: 65  LPASDNSAVTVPGLRVLIIPPSLESAPQAELLERHRAPLCLLHG---RGTVLASVCIGVF 121
           L  + ++        +L++P      P A   E H A L  L     R     S+C G F
Sbjct: 63  LDQAQDA------YDLLLVP----GGPGA-YNECHPALLPWLKAAAPRARRFGSICTGAF 111

Query: 122 FIAASGLLDGRPACTHWNYVHALAQRFPRVRVEAQQPLLDDGDIVTSAGLMAWTDLGLRL 181
            +  +GLLD     THW+Y   L + FP+  VE  +  L DG ++TS G+ A  DL L +
Sbjct: 112 VLGHAGLLDNHRVTTHWHYTERLIKAFPKAIVETDRIYLQDGRLITSGGVTAGIDLALSV 171

Query: 182 LERFLGTTVAQETARYLAVDPVAAPLPG-AVFNP---RLDHGDEAVLKVQHWLQGNGGQD 237
           + +  G  VA + A+ L V  V     G A F+P    +   + A+ +VQ+ +  +  + 
Sbjct: 172 VAQDHGKQVAVDVAKVLLV--VMKRQGGQAQFSPMTAAVAPQETAITRVQNHVLEHLCEP 229

Query: 238 ADLATMAACAGLEARTFLRRFRAATGLRPTEYCQQVRVGRACRLLEFTRRTVEQIAWGVG 297
             + +MAA AG+ AR F R F     + P  + Q  R+ RA +LLE T   ++ +A+  G
Sbjct: 230 FTIESMAALAGMSARHFARLFAKEVQMTPMAFLQGARIDRARQLLETTDLPLKTVAFHAG 289

Query: 298 YQDPGAFRKVFQRVIGLTPSDYRRRFA 324
           +      R +F   +GL P+ YR++F+
Sbjct: 290 FGSVRHMRFLFSEKLGLNPTQYRQQFS 316