Pairwise Alignments

Query, 330 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 312 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  117 bits (294), Expect = 3e-31
 Identities = 95/325 (29%), Positives = 153/325 (47%), Gaps = 26/325 (8%)

Query: 13  IGLLLYPGVQRAAVHGLADLFLVANRVAAELGAVELPHIRVSCWQADETGQLLPASDNSA 72
           + L++YP  Q  ++  L  +F  AN +  E  A E   +      ++  G ++ +   S 
Sbjct: 4   VALMVYPNFQSLSL-SLGSVFECANLLRGE-PAYEFHLV------SESGGAVMTSQGFSV 55

Query: 73  VTVP----GLRVLIIPPSLE-SAPQAELLERHRAPLCLLHGRGTVLASVCIGVFFIAASG 127
            T P    G   LI+   LE   P+A LLE  +A       +   +AS+C+G+F +A +G
Sbjct: 56  NTTPIRPEGYDTLIVSGYLEFRLPEANLLELVKAA----SAQSRRVASLCMGIFVLAEAG 111

Query: 128 LLDGRPACTHWNYVHALAQRFPRVRVEAQQPLLDDGDIVTSAGLMAWTDLGLRLLERFLG 187
           LL+G+   THW +  A  +R+P +R+E  +  + DG + T AG+ A  DL L ++E  LG
Sbjct: 112 LLEGKRTTTHWIHAPAFRKRYPDIRLEEDKLFIVDGHVWTGAGMSAGVDLALAMVENDLG 171

Query: 188 TTVAQETARYLAVDPVAAPLPGAVFNP-----RLDHGDEAVLKVQHWLQGNGGQDADLAT 242
           + +A+  AR L    V A   G+  +       LD   + V     + + N   D  +  
Sbjct: 172 SDLARRIARKL----VIAQRRGSEQSQLSALLELDPKSDRVQLALAYARENLTHDLSVEA 227

Query: 243 MAACAGLEARTFLRRFRAATGLRPTEYCQQVRVGRACRLLEFTRRTVEQIAWGVGYQDPG 302
           +A  A L  R F R FR  TG  P +  + +RV  A  ++E +R  VE +A   G+ D  
Sbjct: 228 LADVARLSPRQFSRVFREETGQTPAKAIESLRVEAARAMMETSRHPVEVVARETGFGDRE 287

Query: 303 AFRKVFQRVIGLTPSDYRRRFAVSG 327
             R+ F R  G  P   ++   + G
Sbjct: 288 RMRQAFLRAFGQPPQVMQQALFIPG 312