Pairwise Alignments

Query, 330 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 334 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  129 bits (324), Expect = 1e-34
 Identities = 78/216 (36%), Positives = 116/216 (53%), Gaps = 3/216 (1%)

Query: 113 LASVCIGVFFIAASGLLDGRPACTHWNYVHALAQRFPRVRVEAQQPLLDDGDIVTSAGLM 172
           + SVC G F +AASG+LDG    THW     LA++FP + VE+    +  G + TSAG+ 
Sbjct: 107 MTSVCTGAFLLAASGMLDGCRVATHWTRCEELARKFPSLTVESNPIFIQQGAVWTSAGVT 166

Query: 173 AWTDLGLRLLERFLGTTVAQETARYLAVDPVAAPLPGAVFNP--RLDHGDEAVLKVQHWL 230
           A  DL L L+E  LG  +A E AR+L V  +  P   + F+    L   D    ++  W+
Sbjct: 167 AGIDLCLALVEEDLGRAIALEVARHLVVF-LKRPGGQSQFSVTLSLQKDDSRFAELHAWM 225

Query: 231 QGNGGQDADLATMAACAGLEARTFLRRFRAATGLRPTEYCQQVRVGRACRLLEFTRRTVE 290
             N   D ++ T+AA AG+  R+F+R +RA TG  P    + +RV  A R L  +  +++
Sbjct: 226 AENLTLDLNIPTLAAQAGMSERSFVRHYRAETGQTPARAVELIRVETARRQLADSTASIK 285

Query: 291 QIAWGVGYQDPGAFRKVFQRVIGLTPSDYRRRFAVS 326
           +IA   G+      R+ F R + +TP  YR RF+ S
Sbjct: 286 RIAVQCGFGCEETLRRSFLRALSVTPQAYRERFSPS 321