Pairwise Alignments

Query, 330 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 321 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  121 bits (303), Expect = 3e-32
 Identities = 101/321 (31%), Positives = 146/321 (45%), Gaps = 15/321 (4%)

Query: 12  DIGLLLYPGVQRAAVHGLADLFLVANRVAAELGAVELPHIRVSCWQAD----------ET 61
           D  +L+ PG   ++V    D+   A  +A   G V  P  R+   Q            +T
Sbjct: 3   DFTILVLPGAFNSSVAVTLDILGAAQALAPRAG-VAPPRWRLCSVQGGPVPLQAGMTIDT 61

Query: 62  GQL--LPASDNSAVTVPGLRVLIIPPSLESAPQAELLERHRAPLCLLHGRGTVLASVCIG 119
            +L   P  D S   VPGL  L  P  +    +++   +  A L      G  +A+ C  
Sbjct: 62  ARLPIRPRDDRSTWVVPGLG-LNTPGDIRRCLESDDAAKAVAGLVRHAKAGGQVAASCSA 120

Query: 120 VFFIAASGLLDGRPACTHWNYVHALAQRFPRVRVEAQQPLLDDGDIVTSAGLMAWTDLGL 179
           VF + A+GLL  R A T W Y   LA+  P   V+A + +  DG +VT+    A TDL L
Sbjct: 121 VFLLNAAGLLQDRRATTSWWYAPLLARMAPGCTVDADRMVCADGPVVTAGAAFAQTDLML 180

Query: 180 RLLERFLGTTVAQETARYLAVDPVAAPLPGAVFNPRLDHGDEAVLKVQHWLQGNGGQDAD 239
            LL    G+ +    +R L +D   A  P  V    L +G++ V K+   ++        
Sbjct: 181 HLLRERCGSALTDLVSRMLLIDGRQAQAP-FVVPELLANGNDLVAKLAARVESALPDAPA 239

Query: 240 LATMAACAGLEARTFLRRFRAATGLRPTEYCQQVRVGRACRLLEFTRRTVEQIAWGVGYQ 299
           ++ +A    +  RT  R    ATG       Q VR+ RA  LLE +R TVEQ+A  VGYQ
Sbjct: 240 VSVLAREFCMSERTLSRHIHKATGKSTQALVQSVRLRRARALLETSRMTVEQVAGAVGYQ 299

Query: 300 DPGAFRKVFQRVIGLTPSDYR 320
           D  A R++ ++V G  PS YR
Sbjct: 300 DATALRRLMKKVAGANPSRYR 320