Pairwise Alignments

Query, 330 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 315 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  111 bits (277), Expect = 3e-29
 Identities = 100/326 (30%), Positives = 148/326 (45%), Gaps = 40/326 (12%)

Query: 13  IGLLLYPGVQRAAVHGLADLFLVANRVAAELGAVELPHIRVSCWQADETGQLLPASDNSA 72
           IG+L++PG Q      + DL  +A   A EL  + L           ETG   P   +S 
Sbjct: 4   IGVLVFPGFQ------ILDLAAIA---AFELANMHLDQPVYCVEMLSETGG--PVVSSSG 52

Query: 73  VTVPGLR-------VLIIPPSLESAPQAELLERHRAPLCLLHGRGTV--LASVCIGVFFI 123
           VTV   R        L++  SL   P +E L +      L  GR +   +AS+C G F +
Sbjct: 53  VTVDSKRYTAAKFDTLVMTGSLTITPTSEKLCQ-----ILRSGRRSARRVASICTGAFGL 107

Query: 124 AASGLLDGRPACTHWNYVHALAQRFPRVRVEAQQPLLDDGDIVTSAGLMAWTDLGLRLLE 183
           A +GLLDGR   THW +   L +  P  +V+  +  ++D  + TSAG+ A  DL L L+E
Sbjct: 108 ADAGLLDGRRVTTHWAFAQELQRCHPLAKVQPDRIFINDDSLWTSAGMTAGIDLVLALVE 167

Query: 184 RFLGTTVAQETARYLAV--------DPVAAPLPGAVFNPRLDHGDEAVLKVQHWLQGNGG 235
             LG  +A+  A+ L V           +A L      P+ D    A+   +  L+    
Sbjct: 168 EDLGVDMARLIAKKLVVYHRRAGGQSQFSALLE---LEPKSDRIQLALAYARAHLR---- 220

Query: 236 QDADLATMAACAGLEARTFLRRFRAATGLRPTEYCQQVRVGRACRLLEFTRRTVEQIAWG 295
           +   +  +A  A L  R F R F+A TG  P +  + +RV  A  L++  R  +  +A  
Sbjct: 221 EGLSVEELAEVAHLSPRQFSRAFKAETGQSPAQAVESLRVEAARALIDEGRLALGVVAQE 280

Query: 296 VGYQDPGAFRKVFQRVIGLTPSDYRR 321
           VG+ DP   R+ F R +G  P   RR
Sbjct: 281 VGFGDPERMRRAFLRTLGQPPQSVRR 306