Pairwise Alignments

Query, 330 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 328 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  118 bits (296), Expect = 2e-31
 Identities = 97/325 (29%), Positives = 145/325 (44%), Gaps = 19/325 (5%)

Query: 9   ANLDIGLLLYPGVQRAAVHGLADLFLVANRVAAELGAVELPHIRVSCWQADETGQ--LLP 66
           A+  + ++L+  V    V G  D F +ANR         L  + ++  QA   G   L  
Sbjct: 6   AHRTVAMVLFNDVLLLDVTGPMDAFAIANRFLPAARQYRL--LTLAEGQAVVRGSCGLKV 63

Query: 67  ASDNSAVTVPGLRVLIIPPSLESAPQAELLERHR-APLCLLHGRGTVLASVCIGVFFIAA 125
            +D     +P    L++ P    A    L    R  P  +   +     ++C GVF +  
Sbjct: 64  VADRRLEDLPEAVDLLLVPGGPGAYDIALPGIERWLPKAVRQAKR--FGAICTGVFLLGR 121

Query: 126 SGLLDGRPACTHWNYVHALAQRFPRVRVEAQQPLLDDGDIVTSAGLMAWTDLGLRLLERF 185
           +GLL+G    THWNYV  LAQ FP  +VE +Q  + D  ++TS G+ A  DL L ++   
Sbjct: 122 AGLLNGYRCTTHWNYVERLAQAFPEAKVETEQIYVMDRCLITSGGITAGIDLALAVVAED 181

Query: 186 LGTTVAQETARYLAV-------DPVAAPLPGAVFNPRLDHGDEAVLKVQHWLQGNGGQDA 238
            G  +A E A+ L V            PL  AV  PR    D  + +VQ ++  +  Q  
Sbjct: 182 HGKALALEVAKVLLVARHRQGGQTPYGPLLAAV--PR---DDSPIARVQAYIVDHIEQAF 236

Query: 239 DLATMAACAGLEARTFLRRFRAATGLRPTEYCQQVRVGRACRLLEFTRRTVEQIAWGVGY 298
            +  MA    +  R F R F    G+ P +Y Q  R+ R  +LLE     ++ +A   G+
Sbjct: 237 TVQKMAELVAMSGRNFARTFLREVGITPLQYLQNARIDRTRKLLECGDLPMKVVAAQCGF 296

Query: 299 QDPGAFRKVFQRVIGLTPSDYRRRF 323
                 RKVF   IG+TP+ YR +F
Sbjct: 297 GSDRHMRKVFFERIGMTPAQYRAQF 321