Pairwise Alignments

Query, 330 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 346 a.a., helix-turn-helix domain-containing protein from Dickeya dadantii 3937

 Score =  112 bits (279), Expect = 2e-29
 Identities = 79/331 (23%), Positives = 151/331 (45%), Gaps = 30/331 (9%)

Query: 13  IGLLLYPGVQRAAVHGLADLFLVANRVAAELGAVELPHIRVS-CWQADETGQLLPASDNS 71
           I +L  PG   +A+ GLAD+F + N+        + P      C++       + ++D  
Sbjct: 3   ISILALPGSMSSAIAGLADMFWMVNQALMTRPEGKAPPAPAGLCFET-----AIISADGK 57

Query: 72  AVTVPGLRVLIIPPSLESAPQAEL-------LERHRAPL---------CLL---HGRGTV 112
            V     R++ +  S +++ ++++       L   + P          C L   + RG +
Sbjct: 58  PVRDAQGRLIYVDSSFDASEKSDMVLATGMMLGPDKLPASATSVGESACWLKQQYQRGAL 117

Query: 113 LASVCIGVFFIAASGLLDGRPACTHWNYVHALAQRFPRVRVEAQQPLLDDGDIVTSAGLM 172
           +   C G F +  +GLLDGR   T W   H   QR+P+ +    + L +   I+T+ G +
Sbjct: 118 IGGACAGSFILGEAGLLDGRFCSTTWWLYHTFKQRYPKAKPVWGKALEEQDGIITTGGPL 177

Query: 173 AWTDLGLRLLERFLGTTVAQETARYLAVDPVAAPLPGAVFNPR--LDHGDEAVLKVQHWL 230
           +W +L L ++ +  G  +A+  A     D  + PL   ++ P+  ++  +  +L+ +H +
Sbjct: 178 SWVELALHIIRQQAGPDIAKLAADIAVAD--SQPLSQRIYAPQGFMNTVNPLLLRAEHLI 235

Query: 231 QGNGGQDADLATMAACAGLEARTFLRRFRAATGLRPTEYCQQVRVGRACRLLEFTRRTVE 290
           +           +A       RT  R+ +  T   P  +  +VR+  AC LLE     ++
Sbjct: 236 RYE-NPSITAEELARALNFSDRTLHRKIKELTNESPKNFITRVRIETACLLLENPIANIK 294

Query: 291 QIAWGVGYQDPGAFRKVFQRVIGLTPSDYRR 321
           ++A   GY +  AFR+ F +++G+TP  YR+
Sbjct: 295 RVAQDCGYSEDTAFRRAFSQLMGMTPVQYRK 325