Pairwise Alignments

Query, 330 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 344 a.a., HTH-type transcriptional regulator CdhR from Azospirillum sp. SherDot2

 Score =  142 bits (357), Expect = 2e-38
 Identities = 101/280 (36%), Positives = 139/280 (49%), Gaps = 36/280 (12%)

Query: 57  QADETGQLLPASDNSAVTVPGLRVLIIPPSLESAPQAELLERHRAPLCLLHGRGTVLASV 116
           +AD    LL  +D   + +PG R      ++E  P A      +A       RG  + S+
Sbjct: 62  EADGGLDLLDQAD--IIVIPGWR-----GAMEPVPTALTAALRQAD-----SRGARILSI 109

Query: 117 CIGVFFIAASGLLDGRPACTHWNYVHALAQRFPRVRVEAQQPLLDDGDIVTSAGLMAWTD 176
           C G F +AASGLL+GR A THW Y   LA  +P +RV      +D+G+I+TSAG  A  D
Sbjct: 110 CSGAFVLAASGLLNGRRATTHWRYAATLADLYPDIRVVPDVLYVDEGNILTSAGSAAGID 169

Query: 177 LGLRLLERFLGTTVAQETARYLAVDP---------VAAPLP----GAVFNPRLDHGDEAV 223
           L L L+ R  G   A   AR L V P         +  P+P    GA   P LDH  E +
Sbjct: 170 LCLHLVRRDFGPEAANSVARRLVVQPHREGGQAQFIETPVPIAREGARLAPLLDHLRETL 229

Query: 224 LKVQHWLQGNGGQDADLATMAACAGLEARTFLRRFRAATGLRPTEYCQQVRVGRACRLLE 283
            +  H L G          MA+ AG+  RTFLRRF+A TG  P ++    R+ RA  +LE
Sbjct: 230 AET-HSLSG----------MASRAGMSLRTFLRRFQAMTGTTPGDWLLTERLARAREVLE 278

Query: 284 FTRRTVEQIAWGVGYQDPGAFRKVFQRVIGLTPSDYRRRF 323
            +   VE++A   G+      R  F++ +GL+P+ YR RF
Sbjct: 279 CSSLPVEEVATLTGFGSAATLRHHFRQRLGLSPASYRTRF 318