Pairwise Alignments

Query, 330 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 337 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

 Score =  237 bits (605), Expect = 3e-67
 Identities = 134/320 (41%), Positives = 184/320 (57%), Gaps = 3/320 (0%)

Query: 3   AKTDTGANLDIGLLLYPGVQRAAVHGLADLFLVANRVAAELGA-VELPHIRVSCWQADET 61
           AK      +++GLL+YP  Q AAV+GL DLF VA+  + +L     L  IRVS W+  E 
Sbjct: 9   AKRKEADFIEVGLLVYPNCQLAAVYGLTDLFRVASEWSTDLQVPTSLRSIRVSYWKI-EN 67

Query: 62  GQLLPASDNSAVTVPGLRVLIIPPSLESAPQAELLERHRAPLCLLHGRGTVLASVCIGVF 121
           G +  + D+       L  +I PPS+    + + +      L   H RG  + S+C G F
Sbjct: 68  GDVSCSWDSHPGIPHSLSYVISPPSIIMPEKMQNMSPASQWLASQHARGVTVCSICAGAF 127

Query: 122 FIAASGLLDGRPACTHWNYVHALAQRFPRVRVEAQQPLLDDGDIVTSAGLMAWTDLGLRL 181
            +A +GL+DGR A THW +   LA++FP + V     ++DDGD++T+ G++AW DLGL L
Sbjct: 128 VLAETGLMDGRRATTHWAFAERLAEQFPSIDVLPDNMIIDDGDVITAGGILAWADLGLLL 187

Query: 182 LERFLGTTVAQETARYLAVDPV-AAPLPGAVFNPRLDHGDEAVLKVQHWLQGNGGQDADL 240
           +E+ LG TV  ETAR+L VDP   +      F PR DHGD+ VL+VQH           +
Sbjct: 188 VEKLLGQTVMLETARFLVVDPPRRSQSRYKAFLPRFDHGDKEVLQVQHQFHATPEMQKSI 247

Query: 241 ATMAACAGLEARTFLRRFRAATGLRPTEYCQQVRVGRACRLLEFTRRTVEQIAWGVGYQD 300
             +A    L  RT  RRF  AT L+ TEY Q VR+ +A +LLE T  +VE IA+ VGY D
Sbjct: 248 GELAESVRLSERTLQRRFFRATRLKLTEYLQNVRIMKARQLLETTNGSVESIAYAVGYID 307

Query: 301 PGAFRKVFQRVIGLTPSDYR 320
           P AFRK+F R+ G  P+ YR
Sbjct: 308 PAAFRKIFGRLTGAKPNVYR 327