Pairwise Alignments

Query, 177 a.a., XRE family transcriptional regulator from Pseudomonas putida KT2440

Subject, 185 a.a., DNA-binding transcriptional repressor (NCBI) from Escherichia coli BW25113

 Score = 47.8 bits (112), Expect = 1e-10
 Identities = 37/165 (22%), Positives = 73/165 (44%), Gaps = 6/165 (3%)

Query: 12  LRNAAGLSQAALAERSGVSRRMLVAIEAGEKNVSLTTLDLIAEALGVAFSTLIQAPDLRD 71
           +R   GLSQ   AE SG++   +  IE  + + +++TL  + +  G++ S     P+  D
Sbjct: 15  IRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEKPD 74

Query: 72  PGRI----EELAWAGEHPQSRAVLLGTSPARREVELWEWTLAPGECYHSEADAEGWSEQI 127
             ++    ++L   G    S  ++   +P R    ++E T  PG         +G  E  
Sbjct: 75  EPQVVINQDDLIEMGSQGVSMKLVHNGNPNRTLAMIFE-TYQPGTTTGERIKHQG-EEIG 132

Query: 128 YVIDGQLTLIIEEVEHRLQVGQFHVFPSNCRYAYRNDGVVAVRFV 172
            V++G++ L I   ++ L  GQ +   +   +++ N      R +
Sbjct: 133 TVLEGEIVLTINGQDYHLVAGQSYAINTGIPHSFSNTSAGICRII 177