Pairwise Alignments

Query, 971 a.a., putative K(+)/H(+) antiporter subunit A/B from Pseudomonas putida KT2440

Subject, 677 a.a., NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) from Variovorax sp. SCN45

 Score =  228 bits (580), Expect = 1e-63
 Identities = 165/517 (31%), Positives = 248/517 (47%), Gaps = 48/517 (9%)

Query: 2   SLIVLLLLPFVGSCLAAVLP------HNARNAESILAGLVALVGTVQVALLYPQVAHGGV 55
           +L+ + L P VG+ +A +        H  R     L  L  LV  +  A+    V   G 
Sbjct: 9   TLLAVPLAPLVGAAVAGLFGTKFGGNHIGRKVTHSLTILGVLVAFIISAMTLKSVIVDGA 68

Query: 56  ----IREEFLWLPSLGMNLVLRMDGFAWLFSLLVLGIGALVSLYARYYMSPQDPVPRFFA 111
                  E++ +  L M +   +DG   +   +V  +  +V +Y   YM   D   RFFA
Sbjct: 69  RFNATLYEWMVVGGLKMEVGFMVDGLTAMMMCVVTFVSLMVHIYTIGYMEEDDGYNRFFA 128

Query: 112 FFLAFMGAMLGLVISGNLIQLVFFWELTSLFSFLLIGYWHHRADARRGAYMALMVTGAGG 171
           +   F  +ML LV+S N++QL F WE   L S+LLIG+W ++  A      A +V   G 
Sbjct: 129 YISLFTFSMLMLVMSNNMLQLFFGWEAVGLVSYLLIGFWFNKPTAIFANMKAFLVNRVGD 188

Query: 172 LCLLVGALLLGHVVGSYDLDKVLAAGHIIR-------QHALYPVLLPLILIGALTKSAQF 224
              ++G  L+    G+ +  +  A    +        +  L  V+   + IGA+ KSAQF
Sbjct: 189 FGFILGIGLIAAYAGTLNYTEAFAKAGTLAGITFPGTEWMLITVICICLFIGAMGKSAQF 248

Query: 225 PFQFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLSGSEEWFWIVGGAGALTLLL 284
           P   WLP +M  PTP+SA +H+ATMV AG+F++AR+ P+   S+     +   GA+T L 
Sbjct: 249 PLHVWLPDSMEGPTPISALIHAATMVTAGIFMVARMSPLFELSDTALSFILVIGAITALF 308

Query: 285 GAFAAMFQNDLKGLLAYSTISHLGLITLLLGLNSPLAAVAAVFHILNHATFKASLFMAAG 344
             F  + QND+K ++AYST+S LG +T+ LG +   A   AVFH++ HA FKA LF+ AG
Sbjct: 309 MGFLGIIQNDIKRVVAYSTLSQLGYMTVALGAS---AYSVAVFHLMTHAFFKALLFLGAG 365

Query: 345 -IIDHESGTRDIRRLSGLIRLVPYTATLAMVASASMAGVPLMNGFLSKEMFFAETVFISS 403
            +I      +DIR + G+ + +P T   +++ S ++ G P   GF SK+    E V   S
Sbjct: 366 SVIIGMHHNQDIRWMGGVRKYMPITWITSLLGSLALIGTPFFAGFYSKDSII-EAVH-ES 423

Query: 404 TAWVEATLPVIATLAGTFSVA-YALRFTVDVFFGPTAQDL-------------------- 442
             W  A     A LAG F  A Y+ R    VF G    D                     
Sbjct: 424 HLW-GANFAYYAVLAGVFITAFYSFRMYFLVFHGKERYDQNPDAHHDDHGHGHDDHGHGH 482

Query: 443 PHTPHEPPRWMRAPVELLVLTCLVVGIFPTQSVGPLL 479
            H PHE P  +  P+ LL +  +V+G     ++ P+L
Sbjct: 483 DHKPHESPWVVWLPLVLLAIPSVVIGF---MTIEPML 516