Pairwise Alignments

Query, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

Subject, 384 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

 Score =  261 bits (668), Expect = 2e-74
 Identities = 149/372 (40%), Positives = 221/372 (59%), Gaps = 6/372 (1%)

Query: 7   QQQIADAVRAFAQERLKPFAEQWDKDHRFPKEAIDEMAELGLFGMLVPEQWGGSDTGYVA 66
           Q  + D+++    + + P A+Q D++ +FP+  I    ++GL    VPE++GG       
Sbjct: 8   QAALLDSLQRVVDKEIAPLAQQMDEEEKFPEHLIRIFGDMGLMQARVPEEYGGPGLDLTT 67

Query: 67  YAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGNEQQKEQFLTPLATGAMLGAFALTEP 126
             MA E +A      + +++ +     +P+L FG ++Q+ ++L  +A G ++ + A+TEP
Sbjct: 68  TCMAKELVARVSMTGAQLINQNTISFVLPLLHFGTDEQRRKWLPRVAKGGVVSSVAITEP 127

Query: 127 QAGSDASSLKTRARLEGDHYVLNGSKQFITSGQNAGVVIVFAVTDPEAGKRG---ISAFI 183
            AGSD  ++KT A  EGDHYV+NG K FIT    A  + +FA T  E  +RG   IS FI
Sbjct: 128 HAGSDVGAMKTNAVREGDHYVVNGQKCFITMAPLADYITLFAKTG-EVNRRGVDNISCFI 186

Query: 184 VPTDSPGYQVARVEDKLGQHASDTCQIVFDNVQVPVANRLGAEGEGYKIALANLEGGRIG 243
           V   S G  +   E  +GQ  +    I FDNV+VPV NR+G EG G+   +  L+  R  
Sbjct: 187 VDMKSAGITLGGSEKMMGQRGTPHADIFFDNVRVPVENRMGEEGRGFISCMHILDLNRPT 246

Query: 244 IASQAVGMARAAFEVARDYANERQSFGKPLIEHQAVAFRLADMATKISVARQMVLHAAAL 303
           +A+ AVG+A+ AF++A  YA ER++FGK + E Q + F LADM  +I  AR ++      
Sbjct: 247 VAASAVGVAQGAFDIAVAYAKERKAFGKAIGEFQGLQFMLADMHIQIEAARALLYKCTRA 306

Query: 304 RDAGR-PALVE-ASMAKLFASEMAEKVCSDALQTLGGYGYLSDFPLERIYRDVRVCQIYE 361
            DAG+   L E ASM K F +++A KV +DA+Q LGG+GY+    +ER+ RD +V QIYE
Sbjct: 307 IDAGQHDRLTEMASMVKCFCTDVAMKVTTDAVQVLGGHGYIRGNHVERMMRDAKVLQIYE 366

Query: 362 GTSDIQRMVIAR 373
           GT+ IQRMVIAR
Sbjct: 367 GTNQIQRMVIAR 378