Pairwise Alignments
Query, 1481 a.a., Leucine-rich repeat domain protein from Pseudomonas putida KT2440
Subject, 1972 a.a., hypothetical protein from Pseudomonas simiae WCS417
Score = 216 bits (550), Expect = 2e-59
Identities = 305/1304 (23%), Positives = 513/1304 (39%), Gaps = 184/1304 (14%)
Query: 16 LPEWLKRASRGQINTLRTSLNAHHASQARLSGLTLELLPLQQFAEKHLAALLDAPLPDGQ 75
+P+W K AS +TL+ ++ +Q+++ L Q F LA LL +
Sbjct: 47 IPQWYKTASPDAHDTLKNRVSRAWEAQSKVDQAMGTLKSPQAFGAPLLAQLLKRRFGIER 106
Query: 76 VFAQLEWLRVAPRFGTLPGTLQQTYGYSQTRENGLL-RLMRNFAANTRYYEGTGLVLSGS 134
+ +LR+ T+P ++ G ++T LL + NF A + +G + +
Sbjct: 107 D-VETTYLRLYIPL-TIPWFSVRS-GAARTWTVSLLDAALHNFEAGEVFEASSGFITKPT 163
Query: 135 DKPLNASLEALITA---------CRNLDVGQRYQDALQRIFP-------PATQAVLAEDK 178
+L AL T CR LD+G +YQ L++ F + Q L +
Sbjct: 164 STGQFDTLPALDTRITVAQFTALCRELDIGAKYQRYLEQFFDFNNPLAMASLQLKLKHSQ 223
Query: 179 RSGLKLATELAALQGNISVDVQLALREVVDPAQEGRQKGLEGKPMLLRAIGRPVVDGLLI 238
+ L +A ++A ++G++ D + + + + + L + + +L
Sbjct: 224 AADLNVALKMAWMKGDLHDDQSVTRLQRLLNTDDNPSTCYPLQCYNLSIMSTALTGIVLF 283
Query: 239 HLQDKAGNERGIVLYLPGDPRQALRFFDNVASMNSTVAMLLQDPGYWQFFTQLISLEHRA 298
+ + G++ Y+P DP L+ + + + + L+ Y QFF++ IS E R
Sbjct: 284 AENIGSRHPVGVIAYIPDDPYAPLKQYPTLVDFMTALGNNLRSAEYQQFFSRFISHEERG 343
Query: 299 GFVSTLGKRLK----------DKLPD----------LELEGETPGGGVFTQLATRQVQRV 338
F + L +RL D LP L G +FT L ++ +V
Sbjct: 344 LFFADLNRRLSKVTWHPHTRGDPLPSWRETPIDQPHLAFRATAISGDLFTHLFQTKLSKV 403
Query: 339 KEDARLLLVPTADADSRAVSARHAEWKAAGLDLVNLAGL----FIPAVGGVLLGQVVAQT 394
DAR + V TA D R R A + ++ +A L F+P VG ++LG Q
Sbjct: 404 FSDARAIAVSTASVDQRVRWERWAIVQKVASAILQIAALIVAPFVPPVGLLMLGYSAYQM 463
Query: 395 CAEVFEGMRDWSKGHQHEALQHLLGVAETLAATAATVAGVSFVRSA-----------FVA 443
E FE + DW+ G EA HLL E +AG SA F
Sbjct: 464 LDEAFEWVIDWAVGDVTEAFAHLLSFVEQGIQLGLFIAGAPIAASALRTLLPADAIKFFD 523
Query: 444 GLEPVSLGNGRSRLWQFNARNY-RSLPGPVDLLEEERGGEA--GRRWVRI-DGRYLEVHQ 499
+PV+L +G++RLW + Y L +G A G+ + + D ++
Sbjct: 524 SFKPVALPDGKTRLWNPDLAPYAHDLRLASHSYPNAQGLHAYNGKNILLLADKPFMVETD 583
Query: 500 PVVDGPYRLRHAASEGGYGPVVLHNGERGWQLMREQPLSWQAPARMLDALWPQLSPVDAH 559
P+ Y L+H Y P +L N + W + PLSW + ++ P+ + +
Sbjct: 584 PITQQRY-LQHPTRSNAYRPPLLSNDKGAWLNELDTPLSWDS-TTLMKRQGPRTAGLSDE 641
Query: 560 QAEQIMRVAGIDADLLRGVLVENRPAPVSLGQTLRAFQAHARIERFFQR-------VRLK 612
Q R++G LR + V P L T+ F+ ++ F + + +
Sbjct: 642 QLVAARRISGTREGALRKMYVNQHQPPPLLTDTVDRFRIDQALQDFIDQMNSDDPAIYRR 701
Query: 613 ALMPSDRELLA----WCEAR---------------PGVGAGLEQMQVHEAGLRPQLFARL 653
A S LLA W +A+ PG +Q+HEA L+ +
Sbjct: 702 ADAQSQLHLLANLELWPKAKTLRFLDSNGRTAWELPG-EKNASVVQIHEAQLKQDVVLET 760
Query: 654 TEQSL------------AADPLSMLVKR-------------------------------- 669
++L DP++ L R
Sbjct: 761 LLEALDEPQRKTLLGEAFGDPVTSLKNRALKLRKQLAGRAQSHRAELFDTRYQQLERPIT 820
Query: 670 --------DFPGLPSAYINEVTGQAHELEHQMARVERRLPLPCAKNARSLLRLARLSRGL 721
+ PGLP + + A+ E + A E ++P+ ++ A+SL AR++
Sbjct: 821 PRQRAMIDNTPGLPLTAADALLDTANSQELK-AVDEGKIPVRLSELAQSLRDEARVNHAY 879
Query: 722 AGLYLSTAYSDVTGELALALLD---SFELEQLDLDLRDRGLDGRSIRRLGSGGRTEARRI 778
GLYL + + T LAL L+ + ++L +++R + + +G R +
Sbjct: 880 DGLYLDSTETLDTHRLALHSLEKLPGWAGKKLRIEIRSSTPEAALLDAIGKPKARIKRTL 939
Query: 779 VVRHEGRFLIYNGSGLPHVFIADEPGCIFEALSAALTSEQRAAMQL---VGSAAARQLRE 835
V +GR+ + SG + A + ++ A+ AL +R A+ L G A LR
Sbjct: 940 VRSPDGRYTPQDDSG--ELSGATD---LYNAVLQALPDAERNALGLHIGQGPALRLALRT 994
Query: 836 KLLARLPATHWDIARMLGWPEEQAWLNPGRRMDDGRVGYPLSGRPG--AAPRDERAIIRD 893
L R P A P R D R L G AAP ++ ++
Sbjct: 995 HALKRAPLRTLITA------------EPTRAPTDTRTHLRLLGLDNYPAAPAEQHD-LQA 1041
Query: 894 QLRSLYPGLDEAALDVELARVQQGPQPVFERLVELQEAHDQLVLYLNRWV--------GA 945
R LYP + + + +++ P F L L++ L L W G
Sbjct: 1042 LARELYPAHTDEQIGEMIQTLERRPGGAFATLTALRQEFQHLNRALADWAARPPHSYPGT 1101
Query: 946 ELQEGR------RAARRLTADSILRAWRLQGEPVSAGEGQTQ-GQRLSMSGLSLRTLPAL 998
E+ GR R R L +L AWR + E + E +Q GQ L + LPAL
Sbjct: 1102 EVSMGRQEYSDMRQNRVLFWRELLSAWRRETETDAYFEHPSQNGQTLKSHAILYGELPAL 1161
Query: 999 PPHIDFHRITLLSVNDTLITDIPADFLRPFTALTHLNLNNNALMRLPTGIAHLPNLQSLR 1058
P + + LS N T +T+I FLR F + HL++ + L +LP ++ +P L +L
Sbjct: 1162 PANFEHISFLELSGNQTALTNIDV-FLRSFPNIRHLSITHAQLGQLPATLSAMPRLNTLI 1220
Query: 1059 LAHNEIRLDAQAISVLHGLSNLVHLDLSHNRLEALDMSFHQLSRLTSLNLRHCRLGSWPR 1118
L++ I L +++ L ++ L LDL N L L S ++ L +L+L + + P
Sbjct: 1221 LSNCAITLTPDSLNTLTAMNRLRTLDLYSNPL-GLSPSVERMIDLRALDLSETGISNLPA 1279
Query: 1119 RLELCGLLERADLRNNQLREVPTEIQLMPYAFRQAILMEDNPLS 1162
L LE A L N++ ++P+ + +P + NPLS
Sbjct: 1280 GLLSRASLELAVLSRNRITQLPSALFELPADTSATFDLSGNPLS 1323
Score = 66.6 bits (161), Expect = 2e-14
Identities = 47/148 (31%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 1024 FLRPFTALTHLNLNNNALMRLPTGIAHLPNLQSLRLAHNEIRLDAQAISVLHGLSNLVHL 1083
F R F L HL + + +P + LP L SLRL + L ++ + L LS L L
Sbjct: 1483 FFRGFPTLNHLFIEGYVMGDIPASVWDLPQLSSLRLPRCALTLSTESTASLTTLSELATL 1542
Query: 1084 DLSHNRLEALDMSFHQLSRLTSLNLRHCRLGSWPRRLELCGLLERADLRNNQLREVPTEI 1143
DLSHN F L RLTS+ L L + P L +R +L NN + ++P
Sbjct: 1543 DLSHNTALGQLPDFSALPRLTSIELEDTGLTAIPDGLLKAVERQRVNLSNNLITQIPDSA 1602
Query: 1144 QLMPYAFRQAILMEDNPLS---VMQQRR 1168
+P + + NPL+ +MQ +R
Sbjct: 1603 FRLPDSVTAVFDLSRNPLNRSGLMQIKR 1630
Score = 66.6 bits (161), Expect = 2e-14
Identities = 74/289 (25%), Positives = 114/289 (39%), Gaps = 25/289 (8%)
Query: 892 RDQLRSLYPGLDE---AALDVELARVQQGPQPVFERL---------------VELQEAHD 933
R+++++LYP E + EL +P E+L V + E H
Sbjct: 1648 RERIKALYPTFTEHEASRFFFELPGDLDAAEPAIEQLETEYAQLRTDLEEWVVNVPERHP 1707
Query: 934 QLVLYLNRWVGAELQEGRRAARRLTADSILRAWRLQGEPVSAGEGQTQGQRLSMSGLSLR 993
+ L+ A+ Q RRA + L + AWR + E + +L+ L
Sbjct: 1708 VVDTPLDEQTRAQDQLNRRAFKTL----LEAAWRRESELDDNNDDVRPTHKLTFEMPILG 1763
Query: 994 TLPALPPHIDFHRITLLSVNDTLITDIPADFLRPFTALTHLNLNNNALMRLPTGIAHLPN 1053
LP L D +T L + T L+ F L L + +L +P LP
Sbjct: 1764 ELPELSARFD--HVTTLDLEGNGTTTRIDGLLKCFPKLRSLVITRFSLGEIPLTALSLPA 1821
Query: 1054 LQSLRLAHNEIRLDAQAISVLHGLSNLVHLDLSHNRLEALDMSFHQLSRLTSLNLRHCRL 1113
L +L L + IRL ++ L +S L +LDL NRL L QL+ L +L L +
Sbjct: 1822 LNALSLTESAIRLTPTSVHALSWMSGLEYLDLGGNRL-GLTPDVSQLTELETLYLPDTDI 1880
Query: 1114 GSWPRRLELCGLLERADLRNNQLREVPTEIQLMPYAFRQAILMEDNPLS 1162
P+ L L DL +N + E+P + + + NPLS
Sbjct: 1881 THLPQGLFALHELRSLDLSDNLIEEIPADFLQLATQLDTDSDISGNPLS 1929
Score = 30.8 bits (68), Expect = 0.001
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 995 LPALPPHIDFHRITLLSVNDTLITDIPADFLRPFTALTHLNLNNNALMRLPTGIAHLPN 1053
L LP R+T + + DT +T IP D L +NL+NN + ++P LP+
Sbjct: 1550 LGQLPDFSALPRLTSIELEDTGLTAIP-DGLLKAVERQRVNLSNNLITQIPDSAFRLPD 1607