Pairwise Alignments

Query, 1481 a.a., Leucine-rich repeat domain protein from Pseudomonas putida KT2440

Subject, 1614 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  260 bits (664), Expect = 9e-73
 Identities = 252/873 (28%), Positives = 381/873 (43%), Gaps = 53/873 (6%)

Query: 631  VGAGLEQMQVHEAGLRPQLFARLT-------EQSLAA-----DPLSMLVKRDFPGLPSAY 678
            +G G+   Q H A L  QL A+L        EQ   A      P   L++R +P LP   
Sbjct: 754  LGEGVAADQEH-AVLSRQLLAQLKADHKPLFEQLYQAYDGPVPPEGALLRRAYPQLPCTL 812

Query: 679  INEVTGQAHELEHQMARVERRLPLPCAKNARSLLRLARLSRGLAGLYLSTAYSDVTGELA 738
            + E+  +   ++ +     +R+P+  A+  +  L   RL R L G       S  T  LA
Sbjct: 813  LRELMAETSTVQRESLHDNQRIPMALAEAVQRALGEQRLDRALMGFEQPELASLDTALLA 872

Query: 739  LALLDSFEL--EQLDLDLRDRGLDGRSIRRLGSGGRTEARRIVVRHEGRFLIYNGSGLPH 796
            +  +        +L L+LR+    G  +  LG+      RR+VVR +  F  +N  GL  
Sbjct: 873  VRSMPRVAGWGRELQLELREDSPQGELLA-LGALTGASVRRVVVRSDAGFEAFNDKGLRI 931

Query: 797  VFIADEPGCIFEALSAALTSEQRAAMQLVGSAAARQLREKLLARLPAT---HWDIARMLG 853
                  P  +FEA+ AALT  QR A+ L    A+   R + +    A            G
Sbjct: 932  GGPYAGPDGLFEAIDAALTGRQRVALGLPPEEASNLWRLRYMCASQAKGERELAAEAFSG 991

Query: 854  WPEEQAWLNPGRRMDDGRVGYPLSGRPGAAPRDERAIIRDQLRSLYPGLDEAALDVELAR 913
              +E        RM D   G PL   P        A++R +++ LYP   +  +   L  
Sbjct: 992  KVKEPVLEAASCRMADSPTG-PLVHPP--------ALVR-KVKGLYPLFSDGQVSSLLLA 1041

Query: 914  VQQGPQPVFERLVELQEAHDQLVLYLNRWV----GAELQEGR---RAARRLTADSILRAW 966
            +        + +  L+     L   L  W     G + Q G    R +R   A+ +   W
Sbjct: 1042 LGADHLSRAKAVKRLEAELAHLRALLRHWKSDIQGLDKQPGLSDIRYSREQVAERLEACW 1101

Query: 967  RLQGEPVSAGEGQTQGQRLSMSGLSLRTLPALPPHIDFHRITLLSVNDTLITDIPADFLR 1026
            R Q    +  E QT    L++ G+ + +LP LPP I F  +  LS+ +  + D  A FL+
Sbjct: 1102 RRQS--FALNEHQTSVPSLNLDGMRIGSLPTLPPEIRFDHVEQLSLKNMQLGDDVAYFLK 1159

Query: 1027 PFTALTHLNLNNNALMRLPTGIAHLPNLQSLRLAHNEIRLDAQAISVLHGLSNLVHLDLS 1086
             F  L  L+L+ N L RLP  ++ +  L SL +  N + L       L  +S L  LDLS
Sbjct: 1160 CFKGLRRLDLDRNRLTRLPEILSRMLALDSLSMPRNRLALTEYTRVKLADMSTLRRLDLS 1219

Query: 1087 HNRLEALDMSFHQLSRLTSLNLRHCRLGSWPRRLELCGLLERADLRNNQLREVPTEIQLM 1146
            HN LE L +   ++  L +L L+  ++   P  L     LE+ DLR N +  +P  +   
Sbjct: 1220 HNPLEKL-VDVGKMRDLHTLLLQDTKITDLPVGLGRLAQLEQMDLRGNSITVLPEWVFTT 1278

Query: 1147 PYAFRQAILMEDNPL--SVMQQRRLYALDVIEEHRHSPEQLGSVDLARARTRWVGHTDAT 1204
            P +F Q++ +  NPL  S ++    Y  +V     +  +    +   +AR  W+    A+
Sbjct: 1279 PRSFSQSVNLGGNPLSRSTVEALERYRDEVGIGMGYVEDDQPRMTELKARALWLPKDTAS 1338

Query: 1205 VQAEREAVWLRLLEQAGSSGLFRLLARLEMTADYSQAGEGRDALVDGVWTLLATLDGDPV 1264
              A + AVW  L +   S+ LF LLA+L  TAD       R+ L   VW +L        
Sbjct: 1339 RDAHKRAVWANLRDDPESAPLFELLAQLSATADSRYV---REDLTRRVWEVLQATHDSVG 1395

Query: 1265 LCRRIFERAGLPLSCLDAVASHFSALQVLVRQAQAEAAAVNPE-RRGELLELGRQLFRLD 1323
            L  R+F+ A  P +C D  A  FS L+VL     A   A   +   G LL+L R LFRL 
Sbjct: 1396 LRERVFQLAAHPANCSDGTAQIFSQLEVLKEVESATLQAGRAQGNSGALLKLSRGLFRLS 1455

Query: 1324 QLEGIAYQDGRQRLAASEH--VDQLALGLAYRVQLRSRLRLPNQPYAMRYPDAVALTQAQ 1381
            +LE IA         A+EH  VD L + LA+RV L   L+LP QP  + +     +T   
Sbjct: 1456 ELEKIA------STYAAEHFSVDPLEVSLAFRVGLAQSLQLPGQPKHLNFALFANVTNEG 1509

Query: 1382 VEDAFLRVTRAQTIEGLTDSLSQRAFWRRYLRQQHDQMFDALSADYTRRTLELQAQRPVL 1441
            +E A  +V  A+        ++Q AFWR +L+QQ    F + +A +  R   L      L
Sbjct: 1510 LEVAHSQVRTAELSPAFLRFITQLAFWRAHLKQQFPDAFQSATASFDSRQQTLFENSQNL 1569

Query: 1442 APAAFEQQLRRLQEQQDLDIERLVAGLTQSYLR 1474
              A + +Q+  L+  +   I  +V  LTQ  L+
Sbjct: 1570 TDAQYLEQMEALRSPRRRAISGVVERLTQQMLK 1602



 Score =  146 bits (369), Expect = 1e-38
 Identities = 147/583 (25%), Positives = 232/583 (39%), Gaps = 58/583 (9%)

Query: 15  RLPEWLKRASRGQINTLRTSLNAHHASQARLSGLTLELLPLQQFAEKHLAALLDAPLPDG 74
           +LP W+  A  G +  L   +     +QA ++     L  L +F  + L           
Sbjct: 39  KLPGWMVNAPPGVLQALEREVVQVAGAQASVAERMKPLQALDEFCNERLKDYCQTRWQLT 98

Query: 75  QVFAQLEWLRVAPRFGTLPGTLQQTYGYSQTRENGLLRLMRNFA---ANTRYYEGTGLVL 131
               +  ++R    + T    LQ        R++ L   M+NF+   A  ++Y    L+ 
Sbjct: 99  LEPKKDRFVRAVNEYETELLPLQYVKKVRLVRDSLLHVAMQNFSEQEAQAQHYPAGSLLQ 158

Query: 132 SGS--DKPLNASLEALITACRNLDVGQRYQ----DALQRIFPPATQAVLAED-------- 177
           SGS   + +  S  A    CR LD+G+ YQ    D L+    PA+      D        
Sbjct: 159 SGSAAGEVIGLSPHAFAQGCRALDLGRLYQQHIRDVLKLDSAPASDEPYINDVATDIGRM 218

Query: 178 KRSGLKLATELAALQGNISVDVQLALREVVDPAQEGRQKGLEGKPMLLRAIGRPVV---- 233
           K   +K+   +A ++G+I+      L  ++D +    Q    G    +R  G PV+    
Sbjct: 219 KTLDMKIDAHIALMRGDITQATYGMLCALLDRSLTPSQAQAAG----VRFQGLPVIWQGL 274

Query: 234 ---DGLLIHLQDKAGNE------RGIVLYLPGDPRQALRFFDNVASMNSTVAMLLQDPGY 284
               G L  +   +G           V+Y+P +P + L  + ++      +    +   Y
Sbjct: 275 NTQGGCLWSILVFSGRSIVQYPHEPCVVYMPNEPERPLFEYSSLDDFQVYLKRKSEVAAY 334

Query: 285 WQFFTQLISLEHRAGFVSTLGKRLKDKLPDLELEGETPGGGVFTQLATR----QVQRVKE 340
             FF++ +S   RAGF S        +       G      +   LA         +++ 
Sbjct: 335 RTFFSRYLSQGDRAGFFS--------RFEHAHTLGVLQENRITVSLAQHFFDAYTAKLQA 386

Query: 341 DARLLLVPTADADSRAVSARHAEWKAAGLDLVNLAGLFIPAVGGVLLGQVVAQTCAEVFE 400
           DAR L VP AD D      R   +  AGL ++NLAG  +P +G ++ G  + Q   E++E
Sbjct: 387 DARALAVPVADVDEEVREQRLQAYLDAGLTVLNLAGFVVPELGMLMTGVALGQMLGELYE 446

Query: 401 GMRDWSKGHQHEALQHLLGVAETLAATAATVAGVSFVRS----------AFVAGLEPVSL 450
           G+ DW +G + EA + L GVAET+ +     AG   V S          +F    E V  
Sbjct: 447 GIEDWRRGDKEEAFKQLAGVAETITSMVLFAAGSKVVGSVLKRSGLSLDSFFGKYEVVRP 506

Query: 451 GNGRSRLWQFNARNYRSLPGPVDLLEEERG--GEAGRRWVRIDGRYLEVHQPVVDGPYRL 508
            +G  RLW+ N   Y      +D   +  G     G  +V I+     V      G +R 
Sbjct: 507 ADGNQRLWRPNFIQYAHDRSLIDEPADASGVYKVEGHSYVVINDCVHRVSFDAKLGQWRA 566

Query: 509 RHAASEGGYGPVVLHNGERGWQLMREQPLSWQAPARMLDALWP 551
            H A    Y P VLHNGE  W+   E+P  W+ P  +   L P
Sbjct: 567 HHPARHTAYRPEVLHNGEGCWRFALEKPDEWEDPEYLFSRLKP 609