Pairwise Alignments

Query, 340 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 363 a.a., hypothetical protein from Variovorax sp. SCN45

 Score = 81.3 bits (199), Expect = 4e-20
 Identities = 56/180 (31%), Positives = 86/180 (47%), Gaps = 4/180 (2%)

Query: 161 LSIDLRCAEPPFCDDYRVMFSENLHFERPRTRMIIASQYLDLPLRRSEEELQRFLAEAPG 220
           L+I LR   P     Y   F   + F +P          L+  L  +       +     
Sbjct: 177 LAISLRYDAPAHASLYEHFFGCPILFGQPHDGFHFDPALLECELPNANAISMAMVRAGCE 236

Query: 221 NILVKYRDPASLGRRIRTDLLRLAPEQWPDA-DRLARQLCLSPSTLRRRLAEEGQNYQGL 279
            +L K      +  R+R  L    PE+   A D +A +L ++P TL R+L E G +++GL
Sbjct: 237 VLLKKLSTRGGIEARVRELLSAQRPEKPALAVDEIANELDMNPRTLHRKLKEAGTSFRGL 296

Query: 280 KDSVRRELAIAWLSQEDVAMGELAERLGFADSSSFYKAFRKWFGCNPGHYRALIQARGAG 339
           + +V  + AIA+L   D+   E+A RLGF+D S+F +AF++W    PG +R     RGAG
Sbjct: 297 RSNVLMDQAIAYLRDTDLTQEEIAARLGFSDGSNFRQAFKRWTNRQPGDFR---PKRGAG 353