Pairwise Alignments

Query, 340 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 337 a.a., AraC family transcriptional regulator from Variovorax sp. OAS795

 Score =  188 bits (478), Expect = 1e-52
 Identities = 113/327 (34%), Positives = 175/327 (53%), Gaps = 3/327 (0%)

Query: 6   TISMQLVREALLQTCPAGEPDSGLLARAGIAVEQLHLPEARVSAESYARLWRLLARRCND 65
           T+++Q V   L+     G   + +L RAGIA   L  P AR+S   YA L R L R   D
Sbjct: 7   TVAIQQVHSILMGARHRGVDPARVLVRAGIAPSLLESPLARISQRQYASLIRALRRELRD 66

Query: 66  EFFAMDTRGLCSGSLAFMCRASMGQPTLGAGLETSLAFLSLMLQDMQPSLVRQQGLAEIV 125
           E + + +  L  GS     R  +   TLG  L    A   L+L D  P L  Q G A + 
Sbjct: 67  EIWGLLSEPLRPGSFGQCMRQLVRCATLGEALRDGFAAYHLLLDDFVPRLTVQGGSARVQ 126

Query: 126 INEPRD-EPRRAFTYFTFWMIVHGVTCWLAGRRIPILSIDLRCAEPPFCDDYRVMFSENL 184
               R+ + R  +    F +     + WL  RRIP+L +D   AE    +  RV +   +
Sbjct: 127 FVLRREADARMDYAVKAFMLFAFNASSWLVARRIPLLEVDYT-AEQTNTETSRV-YQVPI 184

Query: 185 HFERPRTRMIIASQYLDLPLRRSEEELQRFLAEAPGNILVKYRDPASLGRRIRTDLLRLA 244
            + +    M   +++LDLP+ +S + L+ FLA +P N++VKYRD +SL  RIR  L +  
Sbjct: 185 RYGQAHVGMSFEARWLDLPVVQSPQSLREFLAGSPANLIVKYRDASSLTERIRRLLRKRL 244

Query: 245 PEQWPDADRLARQLCLSPSTLRRRLAEEGQNYQGLKDSVRRELAIAWLSQEDVAMGELAE 304
             + P  + +   L ++P TLRRRL +EG+ +Q +KD +RR+ AI +L    + + ++A 
Sbjct: 245 GSELPSLEEVGDALAVTPQTLRRRLRDEGRGFQQIKDELRRDAAIEYLLHTPLPLLDIAN 304

Query: 305 RLGFADSSSFYKAFRKWFGCNPGHYRA 331
           R+GF+++S+F++AF++W G  PG YRA
Sbjct: 305 RVGFSEASTFHRAFKQWTGVAPGEYRA 331