Pairwise Alignments

Query, 340 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 356 a.a., transcriptional regulator, ornithine utilization from Pseudomonas putida KT2440

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 82/307 (26%), Positives = 137/307 (44%), Gaps = 7/307 (2%)

Query: 27  SGLLARAGIAVEQLHLPEARVSAESYARLWRLLARRCNDEFFAMDTRGL--CSGSLAFMC 84
           S LLA +GI    L   +AR++ +   ++      R  D    +  R    C G L +  
Sbjct: 53  SALLAGSGIGPADLGHADARITTQQELQVCANAVARREDIGLELGQRMRVSCYGMLGY-- 110

Query: 85  RASMGQPTLGAGLETSLAFLSLMLQDMQPSLVRQQGLAEIVINEPRDEPRRAFTYFTFWM 144
            A +   TLG  L  +L + +L+    +  L+          ++ +D P  +     F +
Sbjct: 111 -ALLSSATLGDALRLALQYPALLGTVFKLRLLDDGQRVWFSASDYQDSPALSAFNAEFCL 169

Query: 145 IVHGVTCW-LAGRRIPILSIDLRCAEPPFCDDYRVMFSENLHFERPRTRMIIASQYLDLP 203
           +   V C  L GR +P+L        P +   Y   F   + F           ++LD+P
Sbjct: 170 VSLKVICDDLLGRPLPLLGARFEHPRPGYHALYAGAFQCPIGFAAEDNAFAFERRWLDMP 229

Query: 204 LRRSEEELQRFLAEAPGNILVKYRDPASLGRRIRTDLLRLAPEQWPDADRLARQLCLSPS 263
           L  ++    + ++E    + +++    +   RIR  LL    +  P  + LARQ+  S  
Sbjct: 230 LPLADPITHKAMSERCRRLNLEFTGRQAWLGRIR-QLLAQQLDAAPGLEGLARQMNCSSR 288

Query: 264 TLRRRLAEEGQNYQGLKDSVRRELAIAWLSQEDVAMGELAERLGFADSSSFYKAFRKWFG 323
           TLRR L   G +YQ L D +R E A   L+ E + +  +AE LGF++++SF  AF++W G
Sbjct: 289 TLRRHLQALGSSYQQLLDELRFERAKQLLADEQMPIYRIAETLGFSETASFRHAFQRWSG 348

Query: 324 CNPGHYR 330
             P H+R
Sbjct: 349 VAPSHFR 355