Pairwise Alignments

Query, 340 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 341 a.a., transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  222 bits (565), Expect = 1e-62
 Identities = 130/335 (38%), Positives = 191/335 (57%), Gaps = 2/335 (0%)

Query: 4   KDTISMQLVREALLQTCPAGEPDSGLLARAGIAVEQLHLPEARVSAESYARLWRLLARRC 63
           K T S+ LVR+AL      G   + +L+ A I    L    ARV A +++RLW  LA   
Sbjct: 7   KGTTSISLVRDALQGAELRGLDVATVLSHAHIDPRLLDQRYARVPAGTFSRLWIALADLL 66

Query: 64  NDEFFAMDTRGLCSGSLAFMCRASMGQPTLGAGLETSLAFLSLMLQDMQPSLVRQQGLAE 123
           +DEFFA D+  L  GS   M + ++G  T+G  L+  LAFL   L D+  S+  +   A 
Sbjct: 67  DDEFFAADSHPLRRGSFKLMAQLALGCDTIGQALKRILAFLRTALDDIYGSVECEGEHAA 126

Query: 124 IVINEPRDEPRRAFTYFTFWMIVHGVTCWLAGRRIPILSIDLRCAEPPFCDDYRVMFSEN 183
           I+I++   E RR F Y  + ++VHG+ CWL  RRIPI+ + +R  +P    DYR+ F E 
Sbjct: 127 IIIHD-HGELRRVFCYGAWLVLVHGLLCWLCDRRIPIVKLSMRPPQPVDDSDYRMRFCEE 185

Query: 184 LHFERPRTRMIIASQYLDLPLRRSEEELQRFLAEAPGNILVKYRDPASLGRRIRTDLLRL 243
           + +   RT  +    +L   + ++   L  FL   P N LVKYR+  S    IR  L  L
Sbjct: 186 IEWRADRTSAVFEKSFLAYKVCQTPVSLPAFLKGTPSNFLVKYRNDDSTSIMIRRRLKLL 245

Query: 244 APEQWPDADRLARQLCLSPSTLRRRLAEEGQNYQGLKDSVRRELAIAWLSQEDVAMGELA 303
           +P  WP+ D LAR L +S STL+RRL  EG  YQ LKD++RR+++I+ L +  + +  +A
Sbjct: 246 SPHTWPELDELARDLSMSSSTLQRRLYAEGFTYQRLKDNLRRDISISLLCRAGMTVDGVA 305

Query: 304 ERLGFADSSSFYKAFRKWFGCNPGHY-RALIQARG 337
             +GF ++S+F++AF+KW G  PG Y R+L+  RG
Sbjct: 306 SEVGFIETSAFHRAFKKWTGITPGAYRRSLLSPRG 340