Pairwise Alignments

Query, 354 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 380 a.a., Putative transport protein YdiK from Xanthobacter sp. DMC5

 Score = 84.7 bits (208), Expect = 4e-21
 Identities = 84/340 (24%), Positives = 142/340 (41%), Gaps = 31/340 (9%)

Query: 11  LAVLLALVTIAFFW---ILLPYYGAIFWAVILGILFAPLQRHLLIRCGRRRNLAAATSTL 67
           LA+    + + F W   I+ P+  +I W +I+ I   PL   L      R   AA    +
Sbjct: 27  LALRFGTLALLFGWCFTIVQPFLTSILWGLIIAIASHPLFIRLCAALNGRTATAATLFVV 86

Query: 68  VCLLVAILPVIIISALLVQEGATLYQRIESGQLDIAGYVERGKDMLPAFAQRGLDNMG-- 125
           + L + +LP ++++  LV     L   +  G L +           P  A RG   +G  
Sbjct: 87  LALTLLVLPAMLLADTLVNSLKLLAHHMADGTLRLPP---------PPAAVRGWFLVGEP 137

Query: 126 --------MGNLDGLRDKITKWATQGSQVLASQAFSFGQGTFEFLISFGIMMYLLFFFLR 177
                     NLD     +    T   + +   A     G  EF+++  +   L+     
Sbjct: 138 LYSFWMLASTNLDQAISSVASELTWAGKWMLGSATGVLLGILEFVVAIFVAAVLMAN-AT 196

Query: 178 DGPEVARRVRMAVPLPEHQKRRLQLKFNRVVRATVKGNVLVAITQGALGGFIFWVLDIPS 237
            G  +A  V     L             R +R+  KG + VA+ Q  L G  F   DIP+
Sbjct: 197 SGQRIAGDV--VTRLAGSGGLGYADLAVRTIRSVSKGIIGVALIQSLLAGLGFLAADIPA 254

Query: 238 ALVWAVLMAFLSLLPAVGAGIIWAPVAAYFLLTGAILQGVVLTAFGVLVIG--LVDNVLR 295
           A + A+L   ++++  +   I+  PVA Y      +L  +    F V   G  L+++VLR
Sbjct: 255 AGLLALLCLIIAIVQ-LPLAIVLVPVAIYAF---TLLDPMPAVIFAVWCAGVSLIEHVLR 310

Query: 296 PILVGKDTRMPDYLILVSTLGGLAVFGLNGFVIGPLIAAL 335
           PI++G+   +P  ++ +  +GGL   G+ G  +GP++ AL
Sbjct: 311 PIMLGRGVDVPMLVVFIGAIGGLLSSGVLGLFVGPVVLAL 350