Pairwise Alignments

Query, 354 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 350 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  125 bits (315), Expect = 1e-33
 Identities = 100/356 (28%), Positives = 155/356 (43%), Gaps = 17/356 (4%)

Query: 6   LQNKALAVLLALVTI--AFFWILLPYYGAIFWAVILGILFAPLQRHLLIRCGRRRNLAAA 63
           + N  L V + LV +  A  W++ P+  A+ W  IL     PL R L    G R  LAA 
Sbjct: 2   VNNDRLLVQILLVALLGAGLWVMAPFISALLWGAILAFASWPLMRFLTRLLGGRETLAAG 61

Query: 64  TSTLVCLLVAILPVIIISALLVQEGATLYQRIESGQLDIAGYVERGKDMLPAFAQRGLDN 123
             T+  +L+  LP++ +   L          +   Q+D           +P   +R ++ 
Sbjct: 62  LLTMAWILIVALPLVWLGFNLADHIRDATAFVRDVQVDGLPDAPAWLGGIPFVGERLVN- 120

Query: 124 MGMGNLD----GLRDKITKWATQGSQVLASQAFSFGQGTFEFLISFGIMMYLLFFFLRDG 179
            G  +LD     L   I  +  Q    L +++   G G  E  +S    +  +FFF RDG
Sbjct: 121 -GWQSLDQKGAALLTSIKPYFGQVGNWLLARSAQIGSGVLELTLS----LVFVFFFYRDG 175

Query: 180 PEVARRVRMAVPLPEHQKRRLQLKF-NRVVRATVKGNVLVAITQGALGGFIFWVLDIPSA 238
           P +A  V   +     ++    L      V+  V G +  A  Q  L    F +  +P A
Sbjct: 176 PRLAAFVLRLLHRLVGERAEYYLDLVAATVQRVVNGVIGTAAAQALLALIGFLIAGVPGA 235

Query: 239 LVWAVLMAFLSLLPAVGAGIIWAPVAAYFLLTGAILQGVVLTAFGVLVIGLVDNVLRPIL 298
           +V  ++   LSL+P +G  + W P  A+ +  G     V L  +G  VI  VDNVL+P L
Sbjct: 236 IVLGLVTFMLSLIP-MGPPLAWIPATAWLVWKGEYGMAVFLGVWGTFVISGVDNVLKPYL 294

Query: 299 VGKDTRMPDYLILVSTLGGLAVFGLNGFVIGPLIAALFVS---SWAIFAATKPRVQ 351
           + +   +P  ++L+   GGL  FG  G  IGP + A+  S    W+  AA +P  Q
Sbjct: 295 ISRGGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVGYSLLLDWSRNAAQQPPQQ 350