Pairwise Alignments

Query, 362 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 359 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  300 bits (769), Expect = 3e-86
 Identities = 145/356 (40%), Positives = 227/356 (63%), Gaps = 1/356 (0%)

Query: 6   RSLCLLSLVLALPLQAEEKVVNLYSWADYVAPQTLQRFEQETGYKVRYDTFDTPEVLETK 65
           +++ LL L+L   +    + V +Y+W+DY+AP T + F++ETG    YD +D+ E L+ K
Sbjct: 2   KAIALLPLMLVASIGQAAETVKIYNWSDYIAPDTTKNFQKETGIGFTYDVYDSNETLDGK 61

Query: 66  LLTGGSGYDVVVPSSTVLARALKAHALQPLDAQAMPGYGNLDKDLLGKLAEVDPGNRHAV 125
           L+TG SGYDVV PS+  +AR ++  AL+ LD   +P + NL+  LL  L   DPGN H  
Sbjct: 62  LMTGKSGYDVVFPSNHFMARQIQGGALKKLDKSQLPNWKNLNPVLLKALENNDPGNAHGF 121

Query: 126 PYTWGTLGLGVNVEAVRQRLGD-VPLDSLDLLFKPEYATRLKGCGIALPDSPQEVIGVAL 184
           PY WG+ G+G N++ V+  LGD  P+DS DL+FKPE   +L+ CG+A+ D+  E++  AL
Sbjct: 122 PYLWGSTGIGYNIDKVKAVLGDNAPVDSWDLIFKPENMAKLQKCGVAILDNGPELLPAAL 181

Query: 185 NYLGKDPYSQNKDDLAAAQNLLSQLQPSISYVANGRQINDLANGSVCLALTYNGDAAMAA 244
           NYLG   +S+  +D   A++LL +++P ++Y  + +   DLANG +C+A+ ++GD   A 
Sbjct: 182 NYLGLPHHSKKPEDYKKAEDLLMKVRPYVAYFHSSKYTADLANGDICVAVGFSGDILQAE 241

Query: 245 DQARRAGKPFEVIYRIPREGTLVWQDNLVIPKDAPHPEAARAFIAFMLKPESVAALTNTL 304
            +A+ A     + Y IP+EG  +W D + +P DAP+  A  AF+ ++L+P+ +A++TN +
Sbjct: 242 SRAKEAKNGVNIGYNIPKEGAAIWFDMVAMPADAPNEAAGYAFMNYLLRPQVMASITNYV 301

Query: 305 FFANANQAATPLVDEAVRNDPDIYPSAEVRQRLYADRSMALADLRQRNRLWTAFRS 360
            +AN NQAA  LVD A++ D  IYPS E+  +L+A  +M L   R R R+W   R+
Sbjct: 302 HYANGNQAADSLVDPAIKADTKIYPSPEMMGKLFALEAMPLNIDRVRTRVWNTIRT 357