Pairwise Alignments

Query, 362 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 362 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  297 bits (761), Expect = 3e-85
 Identities = 152/358 (42%), Positives = 224/358 (62%), Gaps = 1/358 (0%)

Query: 6   RSLCLLSLVLALPLQAEEK-VVNLYSWADYVAPQTLQRFEQETGYKVRYDTFDTPEVLET 64
           + L  L+LV A    ++    V++Y+W DY+   TL  F+ +TG K  YD FD+ E LE 
Sbjct: 5   KQLFPLALVAAFSSASQAAPTVSVYNWTDYIGETTLADFQAKTGIKPIYDVFDSNETLEG 64

Query: 65  KLLTGGSGYDVVVPSSTVLARALKAHALQPLDAQAMPGYGNLDKDLLGKLAEVDPGNRHA 124
           KLL G +GYDVVVPS+  LAR +KA A   LD   +P + NLD  LL  L + DPGN H+
Sbjct: 65  KLLAGRTGYDVVVPSNHFLARQVKAGAFLKLDRAQLPNFKNLDPKLLKLLEKNDPGNAHS 124

Query: 125 VPYTWGTLGLGVNVEAVRQRLGDVPLDSLDLLFKPEYATRLKGCGIALPDSPQEVIGVAL 184
           VPY WGT G+G NV+ V++ LG   +DS  +LF+PE   +L  CG+A  DS  E+    L
Sbjct: 125 VPYLWGTNGIGYNVDKVKEVLGIDAIDSWAVLFEPENIKKLNQCGVAFLDSADELFPAIL 184

Query: 185 NYLGKDPYSQNKDDLAAAQNLLSQLQPSISYVANGRQINDLANGSVCLALTYNGDAAMAA 244
           NY+GKDP S+N +D   A+  L  L+P I+Y  + + I+DLANG++C+A  Y+GD   AA
Sbjct: 185 NYMGKDPRSENPEDYKQAEAKLLTLRPYITYFHSSKYISDLANGNICVAFGYSGDVFQAA 244

Query: 245 DQARRAGKPFEVIYRIPREGTLVWQDNLVIPKDAPHPEAARAFIAFMLKPESVAALTNTL 304
           ++A+ A    ++ Y IP+EG+ +W D L IP DA HP+ A AFI ++L P+ +A ++ ++
Sbjct: 245 NRAKEAKNGVKIAYSIPKEGSNLWFDLLAIPADASHPKEAHAFINYLLDPQVIAKVSASV 304

Query: 305 FFANANQAATPLVDEAVRNDPDIYPSAEVRQRLYADRSMALADLRQRNRLWTAFRSRQ 362
            +ANAN AA   +D  + N+P++YPS +V  +LY   +   A +R   R W+  ++ +
Sbjct: 305 GYANANPAAKAFMDPELVNNPEVYPSQDVLDKLYISTTPTPATMRLMTRAWSKVKTNK 362