Pairwise Alignments

Query, 362 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 367 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  304 bits (779), Expect = 2e-87
 Identities = 150/346 (43%), Positives = 223/346 (64%), Gaps = 1/346 (0%)

Query: 16  ALPLQAEEKVVNLYSWADYVAPQTLQRFEQETGYKVRYDTFDTPEVLETKLLTGGSGYDV 75
           AL  QAE++ + +Y+W DY+ PQTL  F++++G K+ YD FDT E LE KLLTG SGYDV
Sbjct: 20  ALHAQAEQRTLRVYNWFDYITPQTLTAFQKDSGVKLVYDIFDTNEALEAKLLTGNSGYDV 79

Query: 76  VVPSSTVLARALKAHALQPLDAQAMPGYGNLDKDLLGKLAEVDPGNRHAVPYTWGTLGLG 135
           VVPS+  LA+ ++A   QPLD   +P + +LD  L+  +   DPGN+ AVPY +GT+ +G
Sbjct: 80  VVPSNVFLAKQIEAGVFQPLDRSKLPNWQHLDPALMKLIEANDPGNKFAVPYMYGTVLIG 139

Query: 136 VNVEAVRQRLGD-VPLDSLDLLFKPEYATRLKGCGIALPDSPQEVIGVALNYLGKDPYSQ 194
            N   V+  LGD  P+DS DL+FK E   +LK CG+AL DSP E++ +AL YLG  P S 
Sbjct: 140 FNPAKVKAALGDNAPVDSWDLIFKEENIAKLKQCGVALLDSPSEILPLALQYLGLPPNSD 199

Query: 195 NKDDLAAAQNLLSQLQPSISYVANGRQINDLANGSVCLALTYNGDAAMAADQARRAGKPF 254
              D   A+ L+ +++P I+Y  + + + D+ANG +C+A+ Y+G  + AA++AR A    
Sbjct: 200 KPADYKKAEELMLKIRPHITYFHSSKYMADIANGDICVAVGYSGSFSQAANRAREANNGV 259

Query: 255 EVIYRIPREGTLVWQDNLVIPKDAPHPEAARAFIAFMLKPESVAALTNTLFFANANQAAT 314
            V  R+P+EG  +W D L IPK A +PE A  FI ++L+PE +A +++ + + N N+ AT
Sbjct: 260 VVDMRLPKEGAPIWFDMLAIPKGAANPEDAHTFINYLLRPEVIAPISDFVGYPNPNKDAT 319

Query: 315 PLVDEAVRNDPDIYPSAEVRQRLYADRSMALADLRQRNRLWTAFRS 360
             V+  +RN+P++YP+AE   +LY  + +     R R R WT  +S
Sbjct: 320 DKVNPTIRNNPNLYPTAEAMAKLYTLKPLTRNAERARTRAWTRIKS 365