Pairwise Alignments

Query, 362 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 365 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

 Score =  328 bits (842), Expect = 1e-94
 Identities = 162/363 (44%), Positives = 243/363 (66%), Gaps = 3/363 (0%)

Query: 1   MSAMRRSLCLLSLV--LALPLQAEEKVVNLYSWADYVAPQTLQRFEQETGYKVRYDTFDT 58
           M+ M ++L   +L+  +A  +QAE+KV+N+Y+W+DY+AP T+ +FE++TG KV+YD FD+
Sbjct: 1   MNKMGKTLLAAALMGAMASAVQAEDKVLNVYNWSDYIAPDTIAKFEKQTGIKVKYDVFDS 60

Query: 59  PEVLETKLLTGGSGYDVVVPSSTVLARALKAHALQPLDAQAMPGYGNLDKDLLGKLAEV- 117
            E LE KLL G SGYD+VVPS+  LA+ +KA   + LD   +P + NLD DLL  + +  
Sbjct: 61  NETLEAKLLAGKSGYDIVVPSNNFLAKQIKAGVYEELDRSKLPNWKNLDPDLLKAVGDAS 120

Query: 118 DPGNRHAVPYTWGTLGLGVNVEAVRQRLGDVPLDSLDLLFKPEYATRLKGCGIALPDSPQ 177
           D  N+HA PY WG++G+G N E V+  LG   +DS D++FKPE   +LK CG++  D+P 
Sbjct: 121 DKDNKHAFPYMWGSIGIGYNPEKVKAALGVDKIDSWDVVFKPENIAKLKSCGVSFLDAPT 180

Query: 178 EVIGVALNYLGKDPYSQNKDDLAAAQNLLSQLQPSISYVANGRQINDLANGSVCLALTYN 237
           E++  AL+YLGK   S  K+DL AA++L  +++PSI+Y  + + I D+ANG++C+A+ Y+
Sbjct: 181 EMLPAALHYLGKPTDSTKKEDLKAAEDLFLKIRPSITYFHSSKYIGDMANGNICVAVGYS 240

Query: 238 GDAAMAADQARRAGKPFEVIYRIPREGTLVWQDNLVIPKDAPHPEAARAFIAFMLKPESV 297
           GD   +  +A  AG   +V Y IP+EG   + D + IPKDA H +AA  F+ F+++PE +
Sbjct: 241 GDLEQSKARAHEAGDKVKVDYVIPKEGAGTFYDMVAIPKDAEHKDAAYEFMNFLMQPEIM 300

Query: 298 AALTNTLFFANANQAATPLVDEAVRNDPDIYPSAEVRQRLYADRSMALADLRQRNRLWTA 357
           A +TN + F N N AATP VD+ + +DP IYP AEV+++LYA  +   +  R   R WT 
Sbjct: 301 AEITNAVRFPNGNAAATPFVDKDITSDPSIYPPAEVKKQLYAIAAPDASVQRVITRSWTK 360

Query: 358 FRS 360
            +S
Sbjct: 361 IKS 363