Pairwise Alignments

Query, 817 a.a., Outer membrane ferric siderophore receptor from Pseudomonas putida KT2440

Subject, 885 a.a., ligand-gated channel from Pseudomonas simiae WCS417

 Score =  101 bits (252), Expect = 2e-25
 Identities = 131/564 (23%), Positives = 232/564 (41%), Gaps = 88/564 (15%)

Query: 30  AVALLLGPLHAGAATAAEQTQMQARQ---VQLDLPAQPLDQALTTFADQAGLHLLYTTGD 86
           A+A+ +G   A A   A Q  ++A Q   + LD+PAQ L  A+  FADQAGL +L+ +  
Sbjct: 15  ALAIHVGLFAAAAPVYAAQPAVKAAQPAVLMLDIPAQSLGSAVLAFADQAGLQVLFDSQR 74

Query: 87  VAGQVSPALQGNYSVEQALQQLLAGSGMSWQFSEARTVTLRKAEAAPQAVNLKPIEVSVA 146
           +AG  S  + G YSV++ L +LL  + + ++F+  R VTL + E +  A+ L    ++  
Sbjct: 75  LAGLQSTTVNGQYSVQEGLARLLGNAPVEYRFNGERQVTLTRVEQSGAALALATTTIT-G 133

Query: 147 SRTSTAISEIPGTVWVVDQQQL--------REQIDSGVSLKEAIGKLVPGLDLAPEGRTN 198
              +  +   P +V VV ++QL         E ++    +  A+ +  PGL +   G  +
Sbjct: 134 LHPNDWVYSTPRSVSVVGREQLDRNPPRHAAEMLEEAPGVYSAVSQQDPGLSVNIRGIQD 193

Query: 199 YGQNMRGRNVLVMIDGVSQNSSRGLSRQFDS---ISPFNVERVEVLSGASAIYGG-GATG 254
           YG+      V + +DG+ QN  +   +Q +    +    +  V +  GA++  GG G  G
Sbjct: 194 YGR------VNMSVDGMRQNYQQSGHQQRNGTLYVDSELLSEVVIEKGATSTMGGAGVIG 247

Query: 255 GIINIVT-------KKGEPGPARFETQLGASSGFNNSDDL-ATRFAQSVSGGNERVNARL 306
           G+ N  T       K G+    R     G     N +  + ++ FA      +  + A  
Sbjct: 248 GVANFRTVEAADLLKDGKEIGGRIRVTTGLGGRSNGTHFIGSSAFAVGTDVWDMLLAASE 307

Query: 307 GISGEQNEAFYDGAGD----QIFIDNTQTDLQYNRTIDVLGT--------LGLQLNDQQS 354
              G+ N       GD      F+ N+Q  ++ N T+   G+        LG+ L   Q 
Sbjct: 308 RHLGDYNPGTKGSIGDLRTGTSFLPNSQERIK-NTTVAYSGSVMRSRLLKLGINLPVDQR 366

Query: 355 LDLLAQYYDSGNHGSTGIYFPNLNYNAPSDLEDAELRSGYSSDLEPRTRRLLLNANYHHT 414
           L L        ++ +T + + ++N       E A+L     S                 +
Sbjct: 367 LQL--------SYLTTAVGYDDVNM---MSAEKAQLWEKLGS-----------------S 398

Query: 415 DVLGQDFYLQASYRKEDD--NFYPFPYY-------NRATPTGSRG--VYFAASQQNFEVT 463
           DV  Q+  L  SY  ++   +F    YY       +  T   S+G  V +  +   F+  
Sbjct: 399 DVTAQNVALDYSYTPDNPLIDFKAKLYYVDTRNDQSTLTRGSSKGYEVTYQTNTYGFQAQ 458

Query: 464 SLKGLFAKQWDTLKLTYGVDLDRERFNAEQTTFNAQTSSESGGLELEKDSKADRYPSYRV 523
           ++      +   +K  YG++   ++   +     A  S+ +         K DR      
Sbjct: 459 NMSTFALSELSVIKANYGLEFFYDKVRPDSNQMVASDSAVTASAAESVTPKGDRAMG--- 515

Query: 524 DGVSVYAQLDWHATDNLTLSGGAR 547
              S++ +LD+   + L L+ G R
Sbjct: 516 ---SLFTRLDYDYDNWLNLNAGLR 536