Pairwise Alignments

Query, 817 a.a., Outer membrane ferric siderophore receptor from Pseudomonas putida KT2440

Subject, 811 a.a., ligand-gated channel from Pseudomonas simiae WCS417

 Score = 90.1 bits (222), Expect = 4e-22
 Identities = 92/326 (28%), Positives = 152/326 (46%), Gaps = 38/326 (11%)

Query: 51  MQARQVQLDLPAQPLDQALTTFADQAGLHLLYTTGDVAGQVSPALQGNYSVEQALQQLLA 110
           +QA++++LD+PAQ L  AL  F  QA L +LY+  DVAG+ S A++G    +QA+  LLA
Sbjct: 39  VQAQEIELDIPAQALGSALQEFGRQANLQVLYSPTDVAGKNSTAIKGKLDPQQAINTLLA 98

Query: 111 GSGMSWQFS-EARTVTLRKA----EAAPQAV-------------NLKPIEVSVASRTSTA 152
           G+  +   S  A TVT   A    E +P  V             +  P  ++ A+R +  
Sbjct: 99  GTSTTHSLSGNALTVTAAGASAGLELSPTQVTGNVLGNITEGSGSYTPGTIATATRLTLT 158

Query: 153 ISEIPGTVWVVDQQQLREQIDSGVSLKEAIGKLVPGLDLA--PEGRTNYGQNMRGRNV-L 209
             E P ++ V+ +Q +    D G++  + + +  PG+ ++     RTNY    RG +V  
Sbjct: 159 PRETPQSITVITRQHIE---DFGLNNVDDVMRHTPGITVSAYDTDRTNY--YSRGFSVNS 213

Query: 210 VMIDGVSQNSSRGLSRQFDSISPFNV-ERVEVLSGASAIY-GGGATGGIINIVTKKGEPG 267
              DG+            +++S   + +RVEVL GA+ +  G G+ G  IN++ KK    
Sbjct: 214 FQYDGIPSTVRNVGYSAGNTLSDMAIYDRVEVLKGATGLLNGAGSLGATINLIRKK-PTS 272

Query: 268 PARFETQLGASSGFNNSDDLATRFAQSVSGGNERVNARLGISGEQNEAFYD--GAGDQIF 325
             +   QLGA S  N   ++      + SG    V  R   + +  ++F D      + +
Sbjct: 273 EFKGHVQLGAGSWDNYRSEVDVSGPLTDSG---NVRGRAVAAYQDKKSFMDHYSRKTETY 329

Query: 326 IDNTQTDLQYNRTIDVLGTLGLQLND 351
              T+ DL    + D + T+G    D
Sbjct: 330 YGITEFDL----SPDTMLTVGFDYQD 351