Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 174 a.a., putative RNA polymerase sigma factor FecI from Xanthobacter sp. DMC5

 Score =  132 bits (331), Expect = 9e-36
 Identities = 72/167 (43%), Positives = 101/167 (60%), Gaps = 1/167 (0%)

Query: 3   TSPMSGLLASFQEHYDDLLQFLTRRMSDRQRAADVAQETYLKLVNIDEQAVPVLHARSFI 62
           T P S L+ ++   + DL   L RR+  R  A +  QET+L+L  +    V V    +F+
Sbjct: 5   TDPSSDLMLAYMRQWRDLRAHLCRRVGSRDLAEEALQETWLRLAGMGPAPVGVRDCHAFL 64

Query: 63  FRVAGNLAIDALRREQRIAASHDDSDGACE-VACPAPAPEAALLARERLQILDQALLQLP 121
            R+AGN+AID LRRE+R AA     +     +A   P+PEA  L R+ L++L  AL +L 
Sbjct: 65  LRIAGNIAIDLLRRERRHAARQISDEAVLRGIADATPSPEAYALHRDELRVLVHALAELE 124

Query: 122 DNARQALLLNRVEGLTQKQVAQRLGVSESMVAKYIGQALRHCRGRLK 168
              R ALLL+R +GLT  ++  R+ VS+SMVAKY+ QALRHCR RL+
Sbjct: 125 QRPRAALLLSRCDGLTHAEIGARMKVSDSMVAKYLVQALRHCRDRLR 171