Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 322 a.a., glycerol-3-phosphate ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 76/227 (33%), Positives = 116/227 (51%), Gaps = 26/227 (11%)

Query: 174 ASVVLLVAAVAGWQQAPILL-ADYHTAVGERQVITLTDGTRVTLNSASALSVAFSEHERR 232
           A+  +L+  +  +   P+ L AD+ T VGERQ + L DG++V LN+ SA S    +H+R 
Sbjct: 96  ATAAVLLIGLFSFSNLPVRLQADHLTVVGERQRLQLDDGSKVLLNTNSAFSSNIKDHQRI 155

Query: 233 VVLDAGEALFET-----------ADDSRPFVVETAGA-RVQGNAATFSVQR--------- 271
             L  GEA F+            A   R  V +TA A R     A   VQR         
Sbjct: 156 ARLYQGEAFFDIVPSHGLPLEIDAGPVRASVRDTAFAVRYLNGEAQVQVQRGDVDLSNTF 215

Query: 272 -DGHVVLARGEA-KVGEHELAVAA--DAGTQMAWQRGKLIFNGKPLGQVLTELERYRHGR 327
            D  V L+ GE+ ++G       A  DA   +AW +G+LIF   P+ +VL EL RY  G 
Sbjct: 216 DDARVRLSAGESIRIGPKGFGQPAKLDANKDLAWVQGRLIFENCPMSEVLAELRRYYPGW 275

Query: 328 IVLSDSKLAAMEVSGVFDLDEPEALLRTLEQRYGLKVTYLPWLAVVH 374
           IV ++ +LA++ V+G + LD+P  ++R+L      K++  P L +++
Sbjct: 276 IVNTNDQLASVAVTGNYRLDQPLDVVRSLAHITSAKLSEYPSLVILN 322