Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 328 a.a., Fe2+-dicitrate sensor, membrane component from Variovorax sp. SCN45

 Score =  101 bits (252), Expect = 3e-26
 Identities = 80/238 (33%), Positives = 114/238 (47%), Gaps = 42/238 (17%)

Query: 168 KQAGVAASVVLLVAAVAGW---QQAP--ILLADYHTAVGERQVITLTDGTRVTLNSASAL 222
           ++A +    VLL A  A W   +  P   L A+Y TA GER+ I L DG+R++LN+A+A+
Sbjct: 79  RRALLRTFAVLLGAPAAAWVGYRAVPWQTLGAEYRTATGERRDIALADGSRISLNTATAI 138

Query: 223 SVAFSEHERRVVLDAGEALFETADD-----SRPFVVETAGARVQGNAATFSVQRD----- 272
            V F    R V   AGE L +TA D     SRPFVVET+  R++     F V+RD     
Sbjct: 139 DVVFDAARRTVRQRAGEILVDTAPDPNPGGSRPFVVETSEGRLRALGTRFVVRRDAGDTS 198

Query: 273 -----GHVVLARGEAKVGEHELA---VAADAGTQM------------------AWQRGKL 306
                  + +  G  +V     A   V   AG ++                  AW RG L
Sbjct: 199 GGEGRSQLEVLAGAVEVRPARAASAPVVVPAGQRVSFTADAVGTLSPVGPGAGAWARGVL 258

Query: 307 IFNGKPLGQVLTELERYRHGRIVLSDSKLAAMEVSGVFDLDEPEALLRTLEQRYGLKV 364
                PLG++L E+ RYR G ++  D  +A + VSG F L + + +L  L Q   ++V
Sbjct: 259 YAEEMPLGELLAEIARYRSG-VLRCDPAVAGLRVSGAFQLTDTDRILSVLAQTLPVRV 315