Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 341 a.a., Fe2+-dicitrate sensor, membrane component from Variovorax sp. SCN45

 Score = 90.1 bits (222), Expect = 8e-23
 Identities = 71/229 (31%), Positives = 106/229 (46%), Gaps = 48/229 (20%)

Query: 185 GWQQAPILLADYHTAVGERQVITLTDGTRVTLNSASALSVAFSEHERRVVLDAGEALFET 244
           GW+     LADY T  GE++ +TL DG+ + LN+ +++ V+     R + L  GE L ET
Sbjct: 119 GWRA---WLADYRTGTGEQRSVTLADGSLLMLNTRTSVDVSIDATHRLISLREGEILAET 175

Query: 245 A----------DDSRPFVVETAGARVQGNAATFSVQRDGHVVLARGEAKVGEHELAVAA- 293
           A           DSRPF+V T   R+      F+V+ DG    AR    V E  + V A 
Sbjct: 176 AKHRRVPGAARTDSRPFLVATPHGRILALGTRFTVRTDG----ARTVVSVLEDAVEVRAS 231

Query: 294 ---------DAGTQMA------------------WQRGKLIFNGKPLGQVLTELERYRHG 326
                    +AG Q+A                  W+ G L+ N   LG V+ EL RY  G
Sbjct: 232 RAPGHVVRLEAGQQVAFTGVSIEAPQPADPALAEWEHGSLVVNDWRLGDVVAELARYHRG 291

Query: 327 RIVLSDSKLAAMEVSGVFDLDEPEALLRTLEQRYGLKVTYLP--WLAVV 373
           R+   D  +A + VSG F + + +  L  + + + ++VT L   W+ +V
Sbjct: 292 RLA-CDPAIADIRVSGAFPVMDTDKALAVIVRAFPVRVTGLTRYWVTLV 339