Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 170 a.a., FIG006045: Sigma factor, ECF subfamily from Sphingobium sp. HT1-2

 Score = 90.1 bits (222), Expect = 4e-23
 Identities = 51/152 (33%), Positives = 86/152 (56%), Gaps = 2/152 (1%)

Query: 20  LLQFLTRRMSDRQRAADVAQETYLKLVNIDEQAVPVLHARSFIFRVAGNLAIDALRREQR 79
           LL+ +   + DR  A DV Q  + ++  I++   P+L+ R+++FR+A NLA D +R + R
Sbjct: 19  LLRLVESILRDRPAAEDVTQSLWFRVQRIEDDP-PILNKRAYLFRLAANLAKDRIRADGR 77

Query: 80  IAASHDDSDGACE-VACPAPAPEAALLARERLQILDQALLQLPDNARQALLLNRVEGLTQ 138
            AA    +D   E +       +  L  R+RL +   A+ +LP   R+  +L + + LT 
Sbjct: 78  YAALFHAADTLPEEIPADMVGADTELSDRQRLAVTMAAIDELPARTREIFILRKFDELTL 137

Query: 139 KQVAQRLGVSESMVAKYIGQALRHCRGRLKQA 170
             +A R+G+S SMV +++ QALRHC  RL ++
Sbjct: 138 DDIAHRIGISRSMVVRHLQQALRHCMTRLGES 169