Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 333 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 26/194 (13%)

Query: 196 YHTAVGERQVITLTDGTRVTLNSASALSVAFSEHERRVVLDAGEALFETADDS-RPFVVE 254
           Y TA+GE + + L DG+R+ LN+ S++ VA  +  R++ L  GEA F+ A D  RPF+V 
Sbjct: 123 YRTALGETRTVQLADGSRIHLNTNSSVEVALRDDIRQITLLKGEAQFDVAHDKKRPFIVN 182

Query: 255 TAGARVQGNAATFSVQR----------DGHVVLARGEAKVGEHEL--AVAADAGT----- 297
             G  V+     F+V+           +G V +  G++ V   E   + A  +G+     
Sbjct: 183 ADGTLVRAVGTMFNVRLRADVTELTVIEGIVAVRNGDSAVRRIESGRSAAVRSGSIAVTH 242

Query: 298 --------QMAWQRGKLIFNGKPLGQVLTELERYRHGRIVLSDSKLAAMEVSGVFDLDEP 349
                   + AWQ G + F G  L Q + E  RYR   +V+ D  +A++ V G F LD  
Sbjct: 243 LEPAKIRQRTAWQAGMVEFEGDTLAQAVEEFNRYRPTPLVIGDPAIASLRVGGAFRLDRS 302

Query: 350 EALLRTLEQRYGLK 363
           +  +  LE  +G++
Sbjct: 303 QDFVDALESGFGIR 316