Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 95.1 bits (235), Expect = 1e-24
 Identities = 54/156 (34%), Positives = 94/156 (60%), Gaps = 2/156 (1%)

Query: 14  QEHYDDLLQFLTRRMSDRQRAADVAQETYLKLVNIDEQAVPVLHARSFIFRVAGNLAIDA 73
           + +Y +L+ FL+ R+  RQ A DVA + YL+++     +  + H R+F++R A NL +D 
Sbjct: 2   EHYYRELVSFLSARLGSRQAAEDVAHDAYLRVLE-RTGSEQIEHPRAFLYRTALNLVVDR 60

Query: 74  LRREQRIAASHDDSDGACEVACPAPAPEAALLARERLQILDQALLQLPDNARQALLLNRV 133
            RR+    A   D+  A +    +   +  L   +RL ++ +AL +L    R + LL ++
Sbjct: 61  HRRQLVRQAEPLDALDA-DSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDSFLLRKI 119

Query: 134 EGLTQKQVAQRLGVSESMVAKYIGQALRHCRGRLKQ 169
           EGL+ +Q+A+RLG+S S+V K+I  A++HCR R++Q
Sbjct: 120 EGLSHQQIAERLGISRSLVEKHIVNAMKHCRVRMRQ 155