Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 328 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  100 bits (248), Expect = 7e-26
 Identities = 72/221 (32%), Positives = 108/221 (48%), Gaps = 28/221 (12%)

Query: 164 RGRLKQAGVAASVVLLVAAV--AGWQQAPIL-LADYHTAVGERQVITLTDGTRVTLNSAS 220
           R R  +  +AASV ++   +  +GW    +       TA  ER+ + L DG+ + LN  +
Sbjct: 87  RRRFMRQALAASVAVVALGLGWSGWHHLQLNHQGSLQTAFNERRQVELPDGSHLELNGNT 146

Query: 221 ALSVAFSEHERRVVLDAGEALFETADDS-RPFVVETAGARVQGNAATFSVQRDG---HVV 276
            L V FS  +R V L+AGE +F  A DS RPFVV+TA   V      F V+ D     V 
Sbjct: 147 QLQVEFSAGQRHVRLNAGEVMFSVAHDSNRPFVVDTAQGSVIVTGTRFDVRLDPASTRVA 206

Query: 277 LARGEAKV--------------GEHELA-------VAADAGTQMAWQRGKLIFNGKPLGQ 315
           + +G  +V              G H  A        A + G   AW++GKL+F+   L +
Sbjct: 207 VEQGSVRVQGKGDSPAQLTAGQGSHIDAQGLVAAPYAVNTGAITAWRQGKLVFDNATLAE 266

Query: 316 VLTELERYRHGRIVLSDSKLAAMEVSGVFDLDEPEALLRTL 356
           V+ E  RYR   + ++  K+A + +SG F  ++ +ALLR L
Sbjct: 267 VVAETSRYRRQPLRVAPGKVARLRLSGTFSTNDTDALLRAL 307