Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 318 a.a., putative transmembrane sensor from Pseudomonas putida KT2440

 Score = 90.5 bits (223), Expect = 6e-23
 Identities = 70/220 (31%), Positives = 106/220 (48%), Gaps = 37/220 (16%)

Query: 165 GRLKQAGVAASVVLLVAAVAGWQQAPILLADYHTAVGERQVITLTDGTRVTLNSASALSV 224
           G +  AG A+ +   +  V+ W       +DY T  GER+V TL DG+ + LN+ SA+ +
Sbjct: 90  GGVVMAGSASWLAKDLDTVSAWT------SDYATGTGERRVFTLPDGSLMQLNTCSAVDL 143

Query: 225 AFSEHERRVVLDAGEALFETADDSRPFVVETAGARVQGNAATFSVQRDG---HVVLARGE 281
           AF + +R V L  GE L    +   P +VET  A ++G    F   +D     V ++ G+
Sbjct: 144 AFHDQQRLVRLKLGE-LMINCNPRHPLLVETRDALLEGFEGRFVAYQDSDCTRVSVSHGK 202

Query: 282 AKV----------------------GEHELA-VAADAGTQMAWQRGKLIFNGKPLGQVLT 318
             +                      G H LA +  DA   MAW  G ++     L   L 
Sbjct: 203 VAIHRPGAGQLQWIEGGQNWRLDAQGAHRLAHMDMDA---MAWTEGLIVTQDMRLSNFLA 259

Query: 319 ELERYRHGRIVLSDSKLAAMEVSGVFDLDEPEALLRTLEQ 358
           ++ RYRHG +  S +++A + +SGVF L++PE LLR L Q
Sbjct: 260 QVSRYRHGYLGCS-NEIADLRLSGVFRLEDPEQLLRLLPQ 298