Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 160 a.a., sigma-70 family RNA polymerase sigma factor from Pseudomonas fluorescens SBW25

 Score = 93.2 bits (230), Expect = 4e-24
 Identities = 54/157 (34%), Positives = 91/157 (57%), Gaps = 4/157 (2%)

Query: 14  QEHYDDLLQFLTRRMSDRQRAADVAQETYLKLVNIDEQAVPVLHARSFIFRVAGNLAIDA 73
           + +Y +L+ FL  ++ +RQ A DV  + Y++++       P+   R+F++R A NL ID 
Sbjct: 3   ENYYRELVCFLNAKLGNRQVAEDVVHDAYVRVLERSSDT-PIEQPRAFLYRTALNLVIDG 61

Query: 74  LRREQ-RIAASHDDSDGACEVACPAPAPEAALLARERLQILDQALLQLPDNARQALLLNR 132
            RR   R     D  D   E    A +P       +RL++L++AL +LP   R + LL +
Sbjct: 62  HRRNALRQVEPLDVLDN--EERFAACSPHTTHDHSQRLELLERALAELPPACRDSFLLRK 119

Query: 133 VEGLTQKQVAQRLGVSESMVAKYIGQALRHCRGRLKQ 169
           +EGLT  Q+A+RL +S ++V K+I  A++HCR R+++
Sbjct: 120 LEGLTHVQIAERLCISRALVEKHIVNAMKHCRVRMRE 156