Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 318 a.a., fec operon regulator FecR from Serratia liquefaciens MT49

 Score =  101 bits (251), Expect = 3e-26
 Identities = 90/272 (33%), Positives = 127/272 (46%), Gaps = 37/272 (13%)

Query: 132 RVEGLTQKQVAQRLGVSESMVAKYIGQALRHCRGRLKQAGVAASVVLLVAAVAGWQ--QA 189
           RVE L     +Q  GV      + + QA R  +  L +  +  S++LL+     W   Q+
Sbjct: 52  RVEALQ----SQLQGVPGKFSYRTLDQAGR--QSTLDRRTLLKSLLLLLGVGGSWLGFQS 105

Query: 190 PI---LLADYHTAVGERQVITLTDGTRVTLNSASALSVAFSEHERRVVLDAGEALFETAD 246
           P+   L ADY TA GE + I L+DG+++ LN+ASA+ V +S  +R ++L +GE    T  
Sbjct: 106 PLGRELRADYRTATGEIKPIVLSDGSQLVLNTASAVDVRYSAEKRLILLHSGEISLITGR 165

Query: 247 DSRPFVVETAGARVQGNAATFSVQRDG---------HVVLA--------RGEAKVGEHEL 289
           D RPF VE+    ++     F V+ +          H V A        +     GE   
Sbjct: 166 DDRPFWVESRQGAMRALGTHFLVRENDDQTQLTVLEHAVEAQLAQFPQEKRRVNAGEQIS 225

Query: 290 AVAADAGTQMA------WQRGKLIFNGKPLGQVLTELERYRHGRIVLSDSKLAAMEVSGV 343
             A   G Q A      W RG L  +   L QVL EL RYRHGR+   D  +A + VSG 
Sbjct: 226 FSAVAFGQQQAAGNGDSWTRGVLSVSQWRLDQVLAELARYRHGRLD-CDPAIAGLRVSGS 284

Query: 344 FDLDEPEALLRTLEQRYGLKVTYLP--WLAVV 373
           F L EP+  L  L Q   +++      WL VV
Sbjct: 285 FPLREPDRALLLLSQTLPIRLQSFTRYWLKVV 316