Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 351 a.a., fec operon regulator FecR from Alteromonas macleodii MIT1002

 Score = 86.3 bits (212), Expect = 1e-21
 Identities = 63/208 (30%), Positives = 92/208 (44%), Gaps = 43/208 (20%)

Query: 198 TAVGERQVITLTDGTRVTLNSASALSVAFSEHERRVVLDAGEALFETA-DDSRPFVVETA 256
           T VGE++ +TL DG+++ LN+ S ++V FS   R +VL  GEA FE A D SRPF V   
Sbjct: 127 TGVGEQKNVTLADGSKLHLNTNSVVTVDFSSTARNIVLLKGEAHFEVAHDTSRPFSVTAG 186

Query: 257 GARVQGNAATFSVQ-----------RDGHVVL---------------------------- 277
              V      F++Q            DG V++                            
Sbjct: 187 NNTVTAVGTAFNMQYVDDNAFELVVTDGKVLVKDRFKASSSNESLFTKRPVAEEGLLMFA 246

Query: 278 ---ARGEAKVGEHELAVAADAGTQMAWQRGKLIFNGKPLGQVLTELERYRHGRIVLSDSK 334
              A  + KV   E     D    +AWQ+G ++F G+PL  VL E+ RY   R  +SD  
Sbjct: 247 GEKATVQGKVEGRESMSQNDIDDDLAWQQGMIVFKGEPLEAVLVEIGRYTPVRFNISDES 306

Query: 335 LAAMEVSGVFDLDEPEALLRTLEQRYGL 362
           L    V+G F + + + LL  L+  + +
Sbjct: 307 LRKRRVAGYFKVGDIDGLLSALKSSFNI 334