Pairwise Alignments

Query, 374 a.a., putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein from Pseudomonas putida KT2440

Subject, 323 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score = 90.5 bits (223), Expect = 6e-23
 Identities = 84/304 (27%), Positives = 132/304 (43%), Gaps = 46/304 (15%)

Query: 100 PEAALLARERLQILDQALLQLPDNARQALLLNRVEGLTQKQVAQRLGVSESMVAKYIGQA 159
           PE  L    R   LD      P+N R      R+ G  +  +    G+ E+ V+      
Sbjct: 34  PETELAEFRRWMELD------PENCRAYTAAKRILGEARTAIRSDAGLREAPVSS----- 82

Query: 160 LRHCRGRLKQAGVAASVVLLVAAVAGW--QQAPILL-ADYHTAVGERQVITLTDGTRVTL 216
               RGR     + +SVV + AA   +     P+ + AD  +   E   +TL DG+RV L
Sbjct: 83  --SSRGR---NAIISSVVAIAAAGTLFIALDGPMRMSADIMSDTDEMPEVTLEDGSRVQL 137

Query: 217 NSASALSVAFSEHERRVVLDAGEALFETADDS-RPFVVETAGARVQGNAATFSVQR---D 272
           N++SA+++ F+   R V L  G+A F+ + D+ RPF V      V      F V++   D
Sbjct: 138 NASSAIALDFTSERRTVRLLRGQAFFQVSPDAKRPFSVSADDTLVTALGTAFDVRQSATD 197

Query: 273 GHVVLARGEA------------KVGEHELAV-----------AADAGTQMAWQRGKLIFN 309
             + +                 KVGE E  +             DA T +AW+RG+L  +
Sbjct: 198 TRIAVTEHSVRVDFKEPGALPVKVGEGEEVLHLNETGKSTIRKTDANTALAWRRGQLTVD 257

Query: 310 GKPLGQVLTELERYRHGRIVLSDSKLAAMEVSGVFDLDEPEALLRTLEQRYGLKVTYLPW 369
             PL  V+ E++R+ HGRIV+ +   A   VSG   + + E+ L  L     ++   +  
Sbjct: 258 NMPLSYVIEEIQRHFHGRIVIGNEATARRVVSGTLFVTDTESALNFLRTALNIQTYKIGP 317

Query: 370 LAVV 373
           + VV
Sbjct: 318 IIVV 321