Pairwise Alignments

Query, 309 a.a., transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 299 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  134 bits (338), Expect = 2e-36
 Identities = 104/301 (34%), Positives = 154/301 (51%), Gaps = 23/301 (7%)

Query: 17  FPDLPSLNALRVFEVVARHLNFRLAAEELGVTQAAVAQQIRGLEASLNLRLFERLPRGLA 76
           F  LP L ALR FE  +R L+F+ AA+EL VT  AV+ QIR LE  L + LFERLPR + 
Sbjct: 2   FASLP-LTALRTFESASRLLSFKAAAQELSVTPTAVSHQIRSLETWLGVPLFERLPRQVR 60

Query: 77  LTDAGLGYSGSIRNALAMIDEATRLLRPQAS--HLTVSVTPTFASKWLIPRLGSFAHSHP 134
           LT+ G     S+  AL  + ++   LRPQ S  HLTVS TP FA+ WL+PRLG F  +HP
Sbjct: 61  LTECGERLFHSVHGALLDVAQSLDTLRPQRSTGHLTVSTTPAFAALWLVPRLGRFYAAHP 120

Query: 135 DIDLRVLATDRLSHFNTD-GVNLAVRYGKPDIGAGLNSELLMEQRIVAVASPTLFEASKT 193
            I+LR+     +     D  V+L +RY   D    L    L ++      SP     ++T
Sbjct: 121 GINLRLDTQCEVVDLQQDASVDLVIRYSLDDY-PNLYGLCLFDESFAVYGSPEQVVLAQT 179

Query: 194 PTSFEQLQAFTLL----HDAHDF---WPRFLAQVFPQHGQATARNLRFNQTSLAIDAAIS 246
                  QA TL+    H++  +   W  +  +   +  Q       +++   A+ AAI+
Sbjct: 180 -------QAPTLISVRWHNSKLYALGWQAWCEKAGERWLQDAPVLREYDEEHYALQAAIA 232

Query: 247 GQGIALASLAFVSDDIVAGRLTQVFAQQLRLDKSFY--LVWPRKLQQPESLGIVQRWFKQ 304
           GQG+ LAS   VS+ + +G L   +  ++ +D + Y  L  P + + P      Q W ++
Sbjct: 233 GQGLVLASNILVSESLASGLLVP-YRPRISVDGAGYSALCVPGRERHPPVRAFFQ-WMQE 290

Query: 305 Q 305
           +
Sbjct: 291 E 291