Pairwise Alignments

Query, 289 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 306 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  132 bits (333), Expect = 7e-36
 Identities = 88/282 (31%), Positives = 129/282 (45%), Gaps = 23/282 (8%)

Query: 6   HNPSYMKRFETVLAYIDSHLEGDLSVNALSRIANFSAFHFHRQFTAYMGVPVSRYVQLMR 65
           H   Y  R   VL +ID HL+  L + AL+ +A+FSA+HFHR F A+ G  +  Y++  R
Sbjct: 5   HRCEYEWRMHKVLTHIDDHLDEPLELAALADVAHFSAYHFHRLFAAWAGETLGDYIRRRR 64

Query: 66  LRRAAHQLVASPAMPILEAAFGAGFESPEAFARAFKRAFGMAPSVFAKAPNWQAWSAVFN 125
           +  AA +L   P + +L+AA   GF S EAF+RAF+  FG +P+ +  A  W       N
Sbjct: 65  VEVAALRLATQPRVSVLDAALSVGFGSGEAFSRAFRAHFGSSPTAWRAAHRWAPTDTQSN 124

Query: 126 VPQR-----------------SRSITMQIRIVNFAETHVAALEHQGPPGLVSESV--ARF 166
             Q                  + +  M + ++      +A L + GP G    +    + 
Sbjct: 125 PDQTALHGFTKNVPSSRDTAPTEATPMHVDLITRPPVTIAYLRYVGPFGAPVGAFWNTQV 184

Query: 167 RQWRMHSGQSPVASSRTFGIPYDNPDTTPAHAFRFAVCGEIDEAVQPNDFGVHERVIPAG 226
             W       P A    +GI +D+P  T     R+    E+ E   P D G  + V+P G
Sbjct: 185 APWITVHNLWPHA---RYGISHDDPSITAPEHSRYDAGVEVPEGFVP-DGGFQKTVLPGG 240

Query: 227 RCAVIRHTGSPDYIGETIYPLYRDWLPSSNEELRDHPLFFHY 268
           R A +R  G P  I      L RDWLP+S  +  + P F HY
Sbjct: 241 RYASMRFHGLPPEINAAWTRLLRDWLPASGFQFDNRPAFEHY 282