Pairwise Alignments

Query, 289 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 287 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  110 bits (275), Expect = 4e-29
 Identities = 89/294 (30%), Positives = 132/294 (44%), Gaps = 17/294 (5%)

Query: 1   MTDSQHNPSYMKRFETVLAYIDSHLEGDLSVNALSRIANFSAFHFHRQFTAYMGVPVSRY 60
           M   +    Y  R    +A I +    D  +  L+R+A+FS FHFHR + +  G  V+  
Sbjct: 1   MESRRTEQDYRARVARAVAAIVADPMADHRLEDLARLAHFSPFHFHRVYASVAGETVAAT 60

Query: 61  VQLMRLRRAAHQLVASPAMPILEAAFGAGFESPEAFARAFKRAFGMAPSVFAKAPNWQAW 120
           V+ +RL  A  QL+ +    I + A   G+ESP+AF RAF +  G +P  F +    Q  
Sbjct: 61  VRRVRLALAT-QLLEAGDQSITQVAMAVGYESPQAFTRAFGQFTGQSPRDFQR----QMV 115

Query: 121 SAVFNV---PQRSR--SITMQIRIVNFAETHVAALEHQGPPGLVSESVARFRQWRMHSGQ 175
            AV +V   PQ     S    +RIV      + AL H+G    +  +    R+ R+H+G 
Sbjct: 116 RAVLDVDAMPQAGNDGSTAPTVRIVERQTQRLHALRHRGSFATIPHT---HRRLRLHAGT 172

Query: 176 SPVASSRTFGIPYDNPDTTPAHAFRFAVCGEIDEAVQPNDFGVHERVIPAGRCAVIRHTG 235
             +  S  +G  + +P+ T    FR+       E    +D  V    IP GR AV R  G
Sbjct: 173 RVL--SEHWGASFSDPEDTSG--FRYYAAYASPEPWPEDDTDVELLDIPGGRYAVHRLAG 228

Query: 236 SPDYIGETIYPLYRDWLPSSNEELRDHPLFFHYLSVYPETPLEQWQTDIYVPLK 289
               I   +  LY  WLP S  E  D P   HYL+          +TD+ +P++
Sbjct: 229 PYARINAAVQSLYARWLPGSGYEPDDRPTLEHYLNSPRTVSQADLRTDLLIPIR 282