Pairwise Alignments

Query, 289 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 289 a.a., MDR efflux pump AcrAB transcriptional activator RobA from Escherichia coli ECOR38

 Score = 71.2 bits (173), Expect = 2e-17
 Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 12/182 (6%)

Query: 17  VLAYIDSHLEGDLSVNALSRIANFSAFHFHRQFTAYMGVPVSRYVQLMRLRRAAHQLVAS 76
           +L +++ HL+  LS++ ++  A +S +H  R F    G  +  Y++  RL ++A  L  +
Sbjct: 10  LLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRLT 69

Query: 77  PAMPILEAAFGAGFESPEAFARAFKRAFGMAPSVFAKAPNWQAWSAVFNVPQRSRSITM- 135
            A PIL+ A    F+S + F RAFK+ F   P+++ ++P W A+      P R    TM 
Sbjct: 70  -ARPILDIALQYRFDSQQTFTRAFKKQFAQTPALYRRSPEWSAFG--IRPPLRLGEFTMP 126

Query: 136 QIRIVNFAETHVAALEHQGPPGLVSESVARFRQ------WRMHSGQSPVASSRTFGIPYD 189
           + + V   +T +  +       L  E ++ FR       W    G +P      +G+   
Sbjct: 127 EHKFVTLEDTPLIGVTQSYSCSL--EQISDFRHEMRYQFWHDFLGNAPTIPPVLYGLNET 184

Query: 190 NP 191
            P
Sbjct: 185 RP 186