Pairwise Alignments

Query, 336 a.a., tRNA-dihydrouridine synthase A from Pseudomonas putida KT2440

Subject, 333 a.a., putative TIM-barrel protein, nifR3 family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 73.2 bits (178), Expect = 9e-18
 Identities = 59/237 (24%), Positives = 119/237 (50%), Gaps = 16/237 (6%)

Query: 22  VAPMMDWTDRHCRFFLRLLSRQTLLYTEMVTTGALLHNDAHRFLRHDASEH--PLALQLG 79
           +APM D +D   R   +  +   L+YTE +++  L+ + A    + D  E+  P+ +Q+ 
Sbjct: 16  LAPMEDVSDPPFRAVCKE-NGADLMYTEFISSEGLIRDAAKSVQKLDIFEYERPIGIQIF 74

Query: 80  GSVPADLAACARLAEEAGYDEVNLNVGCPSDRVQNNMIGACLMAHPALVADCVKAMRDAV 139
           G+    +   A +AE+AG D +++N GCP ++V     GA ++     +      +  AV
Sbjct: 75  GNEIDSMREAAAIAEQAGPDILDINYGCPVNKVACKGAGAGILLDIDKMVSMTAEIVKAV 134

Query: 140 STPVTVKHRIGINGRDSYAELSDFVGQVREAGCRSFTVHARIAILEGLSPKENREIPPLR 199
           + PVTVK R+G +  ++   + + V ++++ G ++ +VHAR         ++        
Sbjct: 135 NIPVTVKTRLGWD--NNTIRIVEVVERLQDVGIQAISVHAR--------TRKQMYKGEAD 184

Query: 200 YDIAAQLKRDFP-DLEIVLNGGIKTLDECQAHLETF--DGVMLGREAYHNPYLLAEV 253
           +   A++K +    + +  NG I + +  + + + F  DG+M+GR A   P++  E+
Sbjct: 185 WTYLAKIKENQRIHIPLFGNGDIDSPERAREYRDRFGVDGMMIGRAAIGYPWIFNEI 241