Pairwise Alignments

Query, 235 a.a., VacJ lipoprotein from Pseudomonas putida KT2440

Subject, 270 a.a., surface lipoprotein from Magnetospirillum magneticum AMB-1

 Score =  140 bits (353), Expect = 2e-38
 Identities = 84/242 (34%), Positives = 123/242 (50%), Gaps = 16/242 (6%)

Query: 2   RRIGASVIERVTQACVCASLLLAPAAATQAATEE-----DPWEAVNRPIFRFNDTLDTYA 56
           RR  A ++  V    + A     P A  + A  E     DP E +NR +F FN   D YA
Sbjct: 5   RRTIARLVAPVLALALVAGCATPPPADDKEAVAEWEQVNDPLEPMNRAVFEFNLAADKYA 64

Query: 57  LKPLAKGYQAVTPQFLEDGIHNIFRNLGDVTNLANNVLQLKPHAAGVDTARLIVNTTFGL 116
           +KP A+GY+AV P+F  + +HNI  NL      AN++LQ +   A     R ++N+TFGL
Sbjct: 65  IKPAAEGYRAVMPKFGRERVHNILSNLNSPLVFANDLLQGEADRAVQTFFRAMLNSTFGL 124

Query: 117 GGFFDVGTKMGLQRNDEDFGQTLGYWGVPSGPYVVIPLLGPSTVRDGVAKYPDTYTKPY- 175
            GF DV T  G+  ++ED GQTL  WGV  GP++++P+ GPS  RD V    + +  P+ 
Sbjct: 125 AGFIDVATPAGIPPHEEDIGQTLAVWGVGEGPFLMLPIFGPSNPRDTVGLVAEMFADPFD 184

Query: 176 --------RYIDHVPTRNSIFALDLIDTRASLLSAEKLIQGDKYIFIRNAYLQNREFKVK 227
                    YI +   R  +  LD  +     L   +    D Y  +R+ Y Q+R  ++K
Sbjct: 185 LAMANIGREYISY--ARMGMTGLDKREDLLDTLDEIQRTSLDYYASLRSLYRQHRASEIK 242

Query: 228 DG 229
           +G
Sbjct: 243 NG 244