Pairwise Alignments

Query, 413 a.a., Lipoprotein releasing system, permease protein from Pseudomonas putida KT2440

Subject, 420 a.a., ABC-type antimicrobial peptide transport system, permease component from Variovorax sp. SCN45

 Score = 51.2 bits (121), Expect = 6e-11
 Identities = 58/290 (20%), Positives = 121/290 (41%), Gaps = 38/290 (13%)

Query: 145 FGVVIGELTARRFRLNTGDKLTLIVPEISKEPGGITPRMQRLTVVGIF-KVGAELDGSQA 203
           F  V+G   A +   + G K+TL     S E        +  TVVG+  + G  +D +  
Sbjct: 144 FDAVVGAEVADKLGYHVGQKITLA--HGSGELNVAEHADKPFTVVGVLARTGTPVDRTVH 201

Query: 204 YIHVADAAEMQRWAPGQ-VQGVRLKLHDLYAAPQVSKAIAAGL------GDAYRADDWSH 256
               A  A    W  G  + GV +    +       K + A L         +    W  
Sbjct: 202 IGLPAMEAIHLEWVGGAPMPGVHIPAEQVRKFDLTPKNVTAALVGLKNRAAVFGVQRWIS 261

Query: 257 TQ--------------GSLFSAMKMEKTMIGLLLMMIIAVAAFNIIATLVMVVNDKGPDI 302
           T                 L+S + + +  + L+  ++  V+   +++ ++  +N++  ++
Sbjct: 262 TYTGEPLMAILPGVALDELWSVIGIGENALLLMSALVALVSLAGLVSVVMAGLNERRREL 321

Query: 303 AILRTLGATPAQIMGTFMVQGSLIGIVGTLIGGVLGVIAAFNVSQIVGWLERVSGQHIFT 362
           A+LR +GA    ++    ++G+++ ++G   G V+ V+    ++ +  WL+   G  +  
Sbjct: 322 AVLRAVGAGLRHVLALLALEGAMVTVLGVAFGVVMAVL---GIALLSPWLQAQFGLTLSL 378

Query: 363 SDVYFVSSLPSQLQWGDVAIICTAGLVMSFLATIYPAYRASQVQPAIGLA 412
           S+       P+  +W    ++  + LV  +LA++ P  RA ++  A GL+
Sbjct: 379 SE-------PTLNEW----LLMASLLVAGWLASLLPGIRAYRLSLADGLS 417