Pairwise Alignments

Query, 416 a.a., LolC from Pseudomonas putida KT2440

Subject, 414 a.a., multidrug ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  484 bits (1246), Expect = e-141
 Identities = 238/415 (57%), Positives = 312/415 (75%), Gaps = 2/415 (0%)

Query: 1   MFRPLFAFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
           MFRPL  FIGTRYTRAKRRN FVSFIS+TSMIGLALGV+ MIVVLSVMNGF  EM +R+L
Sbjct: 1   MFRPLSIFIGTRYTRAKRRNRFVSFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60

Query: 61  GMIPHATLESGQPIADWQALAQQVKQNPQVVAVAPFTQMQGLLTHDGKVQKVLLNGIDPA 120
           GM+PHAT+    PI DWQ +A    +NPQV A  PFTQM G+ ++ G +Q + ++GIDPA
Sbjct: 61  GMVPHATIVGVNPIDDWQPVAAAAMKNPQVTAAVPFTQMDGMFSYKGAMQPIEISGIDPA 120

Query: 121 REREVSIIDNFVLQGRLDQLAPGEWGIMIGDKAAAKLGVAIGDKLTFVAPEVSVTPAGMF 180
           +E +VSI+   +++G+LD L PGE+G+++G+  A +  + +GDKLT + PE+S  P G+ 
Sbjct: 121 QEGKVSIVAQHIVRGKLDDLKPGEFGVVVGEITARRFRLNVGDKLTLIVPEISTAPGGIT 180

Query: 181 PRMKRFTVVGTFHVGAGEIDGYLGLTNISDLSRLHRWKPDQVQGLRLKFDDLFQAPRVAW 240
           PRM+R  VVG F VGA E+DG + + +++D + +  W+P+QVQ +RL   DL+ AP+V+ 
Sbjct: 181 PRMQRLNVVGIFKVGA-ELDGSMAMIHMADAAEIQHWQPNQVQSVRLAVKDLYAAPKVSS 239

Query: 241 SIAQQLGDQEFYSRDWTRTHGNLYQAIRMEKAMIGLLLLLIVAVAAFNIISTLVMVVNDK 300
            IA  LG   +   DWT T G+L+ A++MEK MIGLLLL+IVAVAAFNII+TL+MVVNDK
Sbjct: 240 DIAASLG-AAYKPDDWTHTQGSLFSAMKMEKTMIGLLLLMIVAVAAFNIIATLIMVVNDK 298

Query: 301 RGDIAILRTLGATPGQIMLIFMVQGTVIGVIGTLIGAVVGIFAALNVSAAIAGIETLIGH 360
             DIAILRT+GATP QIM IFMVQGTVIG++GTLIG V+G+ AALNVS  +  +E + G 
Sbjct: 299 GADIAILRTIGATPRQIMAIFMVQGTVIGIVGTLIGGVLGVIAALNVSELVGWVERVTGQ 358

Query: 361 KFLNADVYFIDYLPSQILAQDVYMVCGAALVLSFFATLYPAWRAARTQPAEALRY 415
              ++DVYF+  LPS++   DV ++C A  VLSF ATLYPA+RAA+ +PA ALRY
Sbjct: 359 HIFSSDVYFVSNLPSELQGGDVVLICTAGFVLSFLATLYPAYRAAKIEPAHALRY 413