Pairwise Alignments

Query, 1149 a.a., transcription-repair coupling factor from Pseudomonas putida KT2440

Subject, 691 a.a., ATP-dependent DNA helicase RecG from Pseudomonas simiae WCS417

 Score =  239 bits (610), Expect = 5e-67
 Identities = 180/494 (36%), Positives = 260/494 (52%), Gaps = 29/494 (5%)

Query: 494 RYLGLATLEIDGQAA--EFLTLEYAENAKLYVPVANLHLIARYTGSDDALAPLHRLGSEA 551
           R L + TL + G  +  ++L LE A + +L    A+L    RY     A A +  L    
Sbjct: 162 RQLCMQTLTMLGPKSLPDWLPLELARDYQL----ASLDDAIRYLHHPPADADVDELALGH 217

Query: 552 WQKAKRKAAEQVRDVAAELLDIYARRAARKGYAFADPSADY--ATFSAGFPFEETPDQQA 609
                R A E++  +  +L     R + R   A A P A    A + A   F  T  QQ 
Sbjct: 218 HWAQHRLAFEEL--LTHQLSQQRLRESMRSLRAPAMPKATRLPAQYLANLGFAPTGAQQR 275

Query: 610 AIEAVRADMLAPKPMDRLVCGDVGFGKTEVAMRAAFIAVHSGRQVAVLVPTTLLAQQHYN 669
               +  D+   +PM RL+ GDVG GKT VA  AA  A+ +G QVA++ PT +LA+QH+ 
Sbjct: 276 VGNEIAYDLSQQEPMLRLIQGDVGAGKTVVAALAALQALEAGYQVALMAPTEILAEQHFI 335

Query: 670 SFRDRFADWPVTVEVMSRFKSAKEVAAAAADLAEGKIDILIGTHKLLQDDVRFKDLGLAI 729
           +F+       + V  ++     K  AAA   +A G   +++GTH L QD+V+FK+L L I
Sbjct: 336 TFKRWLEPLGLEVAWLAGKLKGKNRAAALEQIAGGA-QMVVGTHALFQDEVQFKNLALVI 394

Query: 730 IDEEHRFGVRQKEQLKAL----RSEVDILTLTATPIPRTLNMAVAGMRDLSIIATPPARR 785
           IDE+HRFGV+Q+  L+      R     L +TATPIPRTL M+     D SI+   P  R
Sbjct: 395 IDEQHRFGVQQRLALRQKGVGGRMNPHQLIMTATPIPRTLAMSAYADLDTSILDELPPGR 454

Query: 786 LSVRT-FVMEQNKSTVKEALLRELLRGGQVYYLHNDVKTIEK--CAA------DLAELVP 836
             V T  V +  +  V E +      G Q Y++   ++  E+  C A      DL   + 
Sbjct: 455 TPVNTVLVTDTRRVEVIERVRGACAEGRQAYWVCTLIEESEELTCQAAETTYEDLTSALG 514

Query: 837 EARIGIGHGQMRERELEQVMSDFYHKRFNVLVASTIIETGIDVPSANTIVIERADKFGLA 896
           E ++G+ HG+M+  E   VM+DF      +LVA+T+IE G+DVP+A+ ++IE  ++ GLA
Sbjct: 515 ELKVGLIHGRMKPAEKAAVMADFKAGNLQLLVATTVIEVGVDVPNASLMIIENPERLGLA 574

Query: 897 QLHQLRGRVGRSHHQAYAYLLTPTRQKVSADAEKRLEAIANTQDLGAGFVLATNDLEIRG 956
           QLHQLRGRVGR    ++  LL      +S    +RL  +  T D   GFV+A  DLE+RG
Sbjct: 575 QLHQLRGRVGRGSAASHCVLL--YHPPLSQIGRQRLGIMRETND---GFVIAEKDLELRG 629

Query: 957 AGELLGEGQSGQIQ 970
            GE+LG  Q+G +Q
Sbjct: 630 PGEMLGTRQTGLLQ 643