Pairwise Alignments

Query, 1149 a.a., transcription-repair coupling factor from Pseudomonas putida KT2440

Subject, 700 a.a., ATP-dependent DNA helicase RecG (EC 3.6.4.12) from Sphingobium sp. HT1-2

 Score =  263 bits (671), Expect = 5e-74
 Identities = 161/381 (42%), Positives = 228/381 (59%), Gaps = 16/381 (4%)

Query: 600 PFEETPDQQAAIEAVRADMLAPKPMDRLVCGDVGFGKTEVAMRAAFIAVHSGRQVAVLVP 659
           PF  T  Q+ AI  +  DM    PM RL+ GDVG GKT VA+ A   AV +G Q A+L P
Sbjct: 269 PFAPTGAQRRAIGEIEGDMAQATPMLRLLQGDVGSGKTLVALMALLNAVEAGMQGAMLAP 328

Query: 660 TTLLAQQHYNSFRDRFADWPVTVEVMSRFKSAKEVAAAAADLAEGKIDILIGTHKLLQDD 719
           T +LA+QHY + R   +  P+ + +++  +  K   A    LA G I IL+GTH + Q+ 
Sbjct: 329 TEILARQHYETLRKMASGLPIEIAILTGREKGKVREATLMGLANGSIHILVGTHAIFQEK 388

Query: 720 VRFKDLGLAIIDEEHRFGVRQKEQL--KALRSEVDILTLTATPIPRTLNMAVAGMRDLSI 777
           V++K LGLA+IDE+HRFGV Q+  L  KA RS   +L +TATPIPRTL +   G  D+S 
Sbjct: 389 VQYKALGLAVIDEQHRFGVAQRMMLASKAERSP-HLLVMTATPIPRTLTLTYYGEMDVSR 447

Query: 778 IATPPARRLSVRTFVMEQNK-STVKEALLRELLRGGQVYY---LHNDVKTIEKCAADL-A 832
           +   P  R  ++T VM  N+   V E L R +  GGQ Y+   L  + +T ++ AA++ A
Sbjct: 448 LDEMPPGRQPIQTLVMSANRLDEVVEGLARHVEGGGQAYWVCPLVEESETSDQAAAEMRA 507

Query: 833 ELVPEA---RIGIGHGQMRERELEQVMSDFYHKRFNVLVASTIIETGIDVPSANTIVIER 889
           E + +    R+G+ HG+M+  + +  M  F   R  +LVA+T+IE G+DVP+++ IVIE 
Sbjct: 508 ETLRQRFGDRVGLVHGKMKGPDKDAAMEAFAANRTQILVATTVIEVGVDVPNSSLIVIEG 567

Query: 890 ADKFGLAQLHQLRGRVGRSHHQAYAYLLTPTRQKVSADAEKRLEAIANTQDLGAGFVLAT 949
           A++FGLAQLHQLRGRVGR    +   LL      +   +  RL  +  T D   GF +A 
Sbjct: 568 AERFGLAQLHQLRGRVGRGDKPSVCLLL--RGNALGETSRARLALMRETND---GFRIAE 622

Query: 950 NDLEIRGAGELLGEGQSGQIQ 970
            DL++RGAGE+LG  QSG+ +
Sbjct: 623 EDLKLRGAGEVLGTRQSGEAE 643