Pairwise Alignments

Query, 202 a.a., transcriptional repressor from Pseudomonas putida KT2440

Subject, 240 a.a., LexA repressor from Agrobacterium fabrum C58

 Score = 94.4 bits (233), Expect = 2e-24
 Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 44/240 (18%)

Query: 4   LTPRQAEILAFIKRCLEDNGFPPTRAEIAQELGFKSPNAAEEHLKALARKGAIEMTPGAS 63
           LT +Q E+L FI   ++++G PP+  E+   L   S +     + AL  +G I   P  +
Sbjct: 2   LTRKQQELLLFIHERMKESGVPPSFDEMKDALDLASKSGIHRLITALEERGFIRRLPNRA 61

Query: 64  RGIRI-----------------------------------PGLEAKAEE----AGLPIIG 84
           R + +                                   P ++A A +    A +P++G
Sbjct: 62  RALEVIKLPEAYTPGARPQRGFSPSVIEGSLGKPKEPEPAPAVKAPANDFAGAATIPVMG 121

Query: 85  RVAAGAPILAEQHIEQSCNINPAFFHPQADYLLRVHGMSMKDVGIFDGDLLAVHTCREAR 144
           R+AAG PI A Q+      +          Y L V G SM + GIFDGD + +     A 
Sbjct: 122 RIAAGVPISAIQNNTHDLAVPVDMLGSGEHYALEVKGDSMIEAGIFDGDTVIIRNGNTAN 181

Query: 145 NGQIVVARIGD-EVTVKRFKREGSKVWLLAENPEFAPIEVDLKEQELV-IEGLSVGVIRR 202
            G IVVA + D E T+KRF+R+G+ + L A NP +   E  +   + V I+G  VG+IRR
Sbjct: 182 PGDIVVALVDDEEATLKRFRRKGASIALEAANPAY---ETRIFGPDRVKIQGKLVGLIRR 238